KEGG   Erigeron canadensis (horseweed): 122595121
Entry
122595121         CDS       T07610                                 
Name
(RefSeq) polyubiquitin
  KO
K08770  ubiquitin B/C
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    122595121
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ecad04121]
    122595121
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ecad04147]
    122595121
Ubiquitin system [BR:ecad04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   122595121
Exosome [BR:ecad04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   122595121
  Exosomal proteins of other body fluids (saliva and urine)
   122595121
  Exosomal proteins of colorectal cancer cells
   122595121
  Exosomal proteins of bladder cancer cells
   122595121
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 TBK1_ULD Rad60-SLD_2 DUF2604 Dsc3_N Ubiquitin_5 OTU1_UBXL UBL_UBAC1 Ribosomal_L40e Ubiquitin_4 Plexin_RBD
Other DBs
NCBI-GeneID: 122595121
NCBI-ProteinID: XP_043623369
LinkDB
Position
4:42172557..42178440
AA seq 189 aa
MQIFVKTLTGKTITLDVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYN
IQKESTLHLVLRLRGGYPRKHCKKMQIFVKTLTGKTITLDVESSDTIDNVKAKIQDKEGI
PPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMFKSDWKSIEPSLLELAKKY
RHYKNICRK
NT seq 570 nt   +upstreamnt  +downstreamnt
atgcagatattcgtgaaaaccttaacagggaaaaccataacccttgatgttgaaagcagc
gacaccatcgacaacgtcaaagccaaaattcaggacaaagaaggtatcccaccagaccag
caacgtttgatctttgcaggaaagcagcttgaagaaggccgtactcttgctgattacaac
atccagaaagaatcaactcttcatttggtgttgaggcttaggggaggatacccacgcaag
cattgtaagaaaatgcagattttcgtgaaaaccttaacagggaaaaccataacccttgat
gttgaaagcagcgacaccattgacaacgtcaaagccaaaattcaggacaaagaaggtatc
ccaccggaccagcaacgtttgatcttcgccggaaagcaacttgaagatggccgtactctt
gctgattacaatatccagaaagagtcgactcttcatttggtgttgaggcttaggggagga
atgttcaagagtgattggaaatcgattgaaccttctttgcttgaattggctaagaagtat
cgccattacaagaacatttgccgcaagtaa

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