Erigeron canadensis (horseweed): 122595143 Help Entry 122595143         CDS       T07610                                  Name (RefSeq) dicer-like protein 4 isoform X1   KO K11592   endoribonuclease Dicer [EC:3.1.26.-] Organism ecad  Erigeron canadensis (horseweed) Brite KEGG Orthology (KO) [BR:ecad00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:ecad03036]     122595143 Chromosome and associated proteins [BR:ecad03036]  Eukaryotic type   Gene silencing    RISC (RNA-induced silencing complex)     122595143    microRNA pathway     RISC loading complex      122595143 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Ribonuclease_3 Ribonucleas_3_3 Dicer_dimer DEAD Helicase_C DND1_DSRM dsrm ResIII PAZ Cas3-like_C_2 Motif Other DBs NCBI-GeneID:  122595143 NCBI-ProteinID:  XP_043623395 LinkDB All DBs Position 4:39625891..39640641 Genome browser AA seq 1627 aa AA seqDB search MGHVSDNIDVMGALAITDLSSDDQSDLAQTQLHRIEKDPRTIARRYQLELCQKALMENII VYLETGCGKTHIAVLVIYETMCLMKRPKKDVCIFLAPTVALVEQQAQVIKESIDVTVGIY CGSSKRLKGHHDWEKELEKFEVLVMTPQILLHNLSHCLIRIEQIALLIFDECHYAQVESN HPYAEIMKIFYKPDVAKLPRIFGMTASPIFGKGASIGSLETLLHAKVYTVESREELDQFV SSPKVNIYYYGTASNTTCDRHVILSGRLETRKAECMLTWITKIEDPSIRKNTKQALQRLH GNLLFCLENLGCWGALQACRILLKGDLIERNEVIEVDEQGSDDVLCCGYLSQVAADLTAE CKKDYGIEANGTEADLSAVETLGVPFFSWKLLRLVGILSKFRAQPDMKCIIFVNRIVTAR SLAYILQQLRLLSAWRCSYLVGVHSGLKNMSRKTTTAILEKFRSGELNLLVATKVGEEGL DIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDRGNQKELSLIQVFQKDEAQMN NEISSRTSMVTDVDFQEKTYKVDSTGAIISSGSSVSLLHRYCSKLPRDEFFNPKPQFFYM DDADGTVCCIILPANAPIYQVTSTPQPSIEAAKKDASLKACQQLHELGALTHYLLPDDEV DGENQDPLDSDSDDEENSRRELHEMLVPAALRVPWTKVEHKTLRLNSYFIKLSPSPADRL YKKFGLFLKAPIPQEAERMSLDIQLARGRSVLTELVPCGGSEFNDDKIVLAERFQEMWLK AIIDKSEFTTDFVRLGKDDVKDDVSNSSLTFYLLLPVTTDEHVRTMTVDWKLITKCLSSP IFKNPEYIKCDQTSDLNNCLYLANGPTQINDILDSLVYVPCKDIFYFVSDYLSGRDSFSK FKDETRYVDHYAEAFKMSFKHPNQPLLKAKQLFRLDNLLRKRGNAEPREKEEHFVELPPE ICVLKIVGFSRDIGSTLSLLPSVVHRLESTLVAIELRHRLSASFSEGSKVSAERILEALT TERCNERFSLERLEVLGDAFLKFAVGRHLFVSNPSLDEGQLTRRRSNMVMNSHLFKLALS KNLQAYIRDQPFEPSHFYPFGRRCSVICTDSTRLSIHSSHESNLKTGANTEVRCNKGHHW LQKKAVADIVEALVGAFIVESGFKAAIAFLKWIGIPVDFRGSDVADICASSTTFTFLSAQ VDTPALEELLGYRFRHKGLLFQAFLHPSYHNNFGGCYQRLEFLGDAVLDYLITSYLYSVY PNLKPGQLTDLRSFSVNNNSFAGIAVSRSFYKYLLCDSSSLTQAMNKYAEFFMTTSPDNG LVETVSCPKALGDLVESSVGAILLDSGLNLEVVWNTMISFLDPVMKFSALQLNPIRELQE LCQFYDWELTFPSVKKDRMFLVNAVVEGKEVSETACATNSNKKTAKKIACQIVYLSLKDK GYKTKMKTLEEVLRSSVKMEAKLIGYDEIPTDIDVLYANQVKDLTTIGVRSSQEGHSRSI NSVKSNSRIKRMVQPTPQCSSSGSNTDSNSQAPAEIAGDALRKPSAKSHLYEICAINCWK PPLFECFEELGPAHLKQFAFKVTVTIEEASNTILECIGDHRAKKKDAAEFAAQGAIWYLK QTGYLNN NT seq 4884 nt NT seq  +upstreamnt  +downstreamnt atgggtcatgtcagcgacaacattgatgtaatgggtgctcttgcgatcactgacctgagt tcagatgatcagtcggatttggcccaaacccagttgcacagaatcgaaaaagatcccaga acaattgctagaaggtaccaacttgaattatgtcaaaaggctttaatggagaacattata gtgtatttagaaacaggatgtggcaagacccacattgctgttttggttatttatgagacc atgtgcttgatgaagaggcccaaaaaggacgtctgtatttttcttgctccaacggtagct ctcgttgagcaacaagcgcaggttataaaagaatctattgatgtaacagtcggaatctac tgtgggagttcaaaacgtttgaagggtcatcatgattgggagaaggaattggagaaattc gaggttcttgtcatgactccgcaaattctattacataatttatcacattgcttaattagg attgaacaaattgcccttttgatattcgatgagtgccactatgcacaagttgaaagcaat catccttatgctgaaatcatgaagatattttacaaaccagatgttgctaaacttcctcgt atatttggcatgactgcatcaccaatatttgggaaaggtgcttccattggtagtcttgag accttacttcatgcaaaggtttatactgttgaatccagggaagaactagaccaatttgtg tcatctccaaaagttaatatctattattatggcactgcctcaaatactacatgtgaccgt catgttattctttctggaagacttgaaacaagaaaggcagagtgtatgttgacttggatc acgaaaattgaggatccttctattcgcaagaacaccaaacaggcactccagcgtcttcat ggcaatctattgttttgtctggaaaatctaggctgttggggtgcattacaagcttgtcgg attctattaaaaggtgatcttattgagagaaacgaagttattgaggtagatgagcaagga agtgatgatgttctgtgttgtggttatctatctcaagttgccgccgacttaaccgccgaa tgcaaaaaagattatggtattgaagcaaatggcactgaagctgatttatcagcggtggag actttgggagttccctttttctcatggaagctcttaagactcgtgggaattctttccaaa tttagggcacagccggatatgaaatgtattatatttgtaaatagaattgtaacagctaga tcattggcatacatccttcagcaacttagacttttgtcggcatggaggtgcagctaccta gtaggagttcactctggactgaagaatatgtcacggaagaccacaactgccattctcgag aagtttcgttccggtgagctaaatttgctagtagcaactaaagtgggcgaagaaggactt gatatccaaacatgctgccttgttataagatttgatcttcctgaaaccgttgccagtttc atacaatcgagaggacgtgcacggatgccacaatctgaatacgcatttttggtggacaga ggaaaccaaaaggagctgagcttgatacaggtttttcaaaaggatgaagcccagatgaac aatgaaatatcttcacggacatctatggtaacagatgttgattttcaggagaaaacttat aaagtggattcaacgggtgccatcattagctctggatctagtgtgtcccttcttcatcga tattgctcaaaactaccacgcgatgaattcttcaaccctaagccacagtttttttatatg gatgatgctgatggaacagtttgctgcataattcttcctgctaatgctccaatataccaa gttacaagtacgcctcaaccgtcaatcgaggcagcaaagaaagatgctagtttgaaagca tgccaacaattgcatgaattgggtgctttgacacactatctcttgcctgatgatgaagtt gatggtgaaaatcaagatcctttggattcagatagcgatgatgaagaaaattcacgaaga gagctccatgagatgcttgtaccagctgcccttcgagttccatggactaaggtcgaacat aaaacactccgtctcaactcgtatttcatcaagcttagcccttcgcccgctgatagactt tacaaaaaatttggtctatttctaaaagctcccatccctcaagaggcagaaagaatgagc cttgatatccaactggctcgtggtcgatctgtattgactgagcttgtcccttgtggcggt tcagaatttaatgacgataagattgtgctagcagagaggttccaagagatgtggctgaag gccataatagacaagtcagaatttaccacagattttgttcgattgggtaaagatgatgtc aaagatgatgtcagcaattcatccttgacattctacttattgctacccgtgaccacagat gaacacgtacgaacaatgactgtggactggaagctcattacaaaatgtttgtcatcacca attttcaaaaatccagaatatatcaagtgtgatcaaacatcggacttgaacaattgtttg tatctcgctaatgggcccacacagatcaatgacatattggatagtttggtatatgtccct tgcaaggatattttttactttgtttcggattatctttctggaagagattcttttagtaaa tttaaagatgaaacaagatatgtcgaccactatgctgaagcatttaaaatgagttttaag caccccaaccagcctcttctgaaagcaaagcaactgtttcgtttggacaacttgctgcga aagagaggaaatgcagaaccacgagaaaaagaggagcactttgtggagttacctcctgaa atatgcgtactgaaaatcgtgggattttcaagggacattggaagtacactctctttattg ccttcagttgtacacagattagaaagcactcttgttgccatcgaattgagacataggtta tctgcttcattctctgaagggtcaaaagtttctgcagagcgtattcttgaagcacttaca accgagagatgcaatgagcgcttttcccttgagaggcttgaggttttgggtgatgcgttc cttaaatttgcagttggcagacatcttttcgtatcaaacccctcccttgatgaaggacaa cttactcggaggcgttcaaatatggttatgaattcgcatttattcaagttggcattatca aagaatttacaagcttatatacgtgatcaaccgtttgagccttcccacttttaccctttt ggtcgaagatgctcagtgatatgcactgacagcacgagattaagcatccattcttcacat gagagcaatttgaagacaggtgcaaacactgaagttagatgcaataaaggtcatcactgg ttacagaagaaagctgtggcggacattgtggaagctcttgttggagcctttatagttgaa agtggtttcaaagcagcaattgcatttcttaaatggattggtattccagtggacttcaga ggctcagatgtcgctgacatatgtgcttcaagcacaacatttacctttcttagtgctcaa gttgacactcctgcccttgaagagcttttgggatatcgatttcggcataagggtcttctc tttcaggcattcttacatccatcctaccataacaattttggtggctgctatcagagattg gagtttcttggagatgctgtgttggattacttgatcacgtcttatctttattcggtatat ccaaacttgaagcctggtcagttgactgatttaaggtccttttcagtcaacaataattct ttcgcgggtattgctgtaagtcgatctttctacaagtatctgctatgtgattctagtagt ttgacccaggcaatgaataagtatgccgaattctttatgactacttcgccagacaacggt ttggttgaaacagtatcatgtcctaaggctcttggtgatttggtagaatcgtctgtggga gccattctacttgattctggattgaatttggaggtggtttggaacacaatgatttcgttt ttggatcctgtcatgaaattttcagctttgcagcttaatcccattagagaacttcaggaa ctttgtcagttttatgattgggaattgacatttccttcagtgaagaaagacaggatgttc ttggttaatgctgtcgttgaaggaaaagaagttagtgagactgcttgtgctaccaattct aataaaaaaaccgccaagaaaatagcttgtcaaatagtgtatttgtcattgaaggacaag ggctacaagacaaagatgaaaactttagaggaagtattgagatcgagtgtaaagatggaa gcaaagttgattggatatgatgaaataccaacagatatagatgttttgtatgccaatcaa gttaaagacttgaccacgattggagttagaagttcccaagaagggcattcccgttctata aactctgtgaaaagcaatagcagaattaaacgtatggtgcagcccacacctcaatgcagt tcttctggcagcaatactgatagcaattcacaagcacctgcagaaattgcaggtgatgca ttgcgcaagccatcagcaaagtcacatttgtatgaaatctgtgctatcaactgttggaaa cccccattgttcgagtgttttgaagaattaggaccagcccaccttaaacagtttgcattc aaagttactgtaacaatcgaagaagcctcaaatacaatcttggagtgcattggagatcat cgggctaaaaagaaagatgcagctgagtttgcagctcaaggcgcaatttggtacttgaag caaaccgggtacttaaataactag

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