KEGG   Erigeron canadensis (horseweed): 122595180
Entry
122595180         CDS       T07610                                 
Name
(RefSeq) protein transport protein SEC31 homolog B-like isoform X1
  KO
K14005  protein transport protein SEC31
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    122595180
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ecad04131]
    122595180
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ecad02044]
    122595180
Membrane trafficking [BR:ecad04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    122595180
Secretion system [BR:ecad02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   122595180
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_Prp19 Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st Beta-prop_EML_2 WD40 Beta-prop_RIG_2nd WDR55 TPR_Sec16 Beta-prop_EIPR1 TPR_GEMI5 SRA1 Beta-prop_EML Beta-prop_WDR90_POC16_2nd MIOS_WD40 Prp18
Other DBs
NCBI-GeneID: 122595180
NCBI-ProteinID: XP_043623446
LinkDB
Position
4:complement(26811256..26822357)
AA seq 1098 aa
MDTSACIKEVNRSASVAFAPDAPYIAAGTMAGAVDMSFSSSANLEIFKLDFQSDDHNLPL
VGSIPSSEPFNRLSWGKSPLPSSEEFGLGLVAGGLVDGNIGIWNPKILISSEDNKSALIQ
QLSKHKGPVRGLEFSGLSPNHLASGAEEGEICIWDISKPSEPTHFPPLKGSASAKQSEIS
YLSWNRKVQPILASTSVNGTTVVWDLRKQKPIISFSDSVRRRCSVLQWHPDFATQLIVAS
DDDTSPSLRMWDMRNTMSPLRELVGHDKGVVAMSWCPNDSSYLLTCAKDNRTICWDTNSA
AIVSELPAGTNWNFDVHWYPKIPGIISASSFDGKIGIYNIEACARYGAGENYYSSAPLKA
PKWYQRKAGVSFGFGGKLVSFHSTGSSGPSEVNVHDLVTEHNLVSTSSEFEEAMRSGDRS
SFRVLCDNKSQQSESEEERETWGFLKVMFEDEGTARTKLLNHLGFTLPAEVNDNVQELSH
DVNSLNFEEHEAKKEEFTGGNLTPIDNGEDFFNNLPSPKCDTPVSTPGKNTEESVPFVDE
QTMESDLHGGHTDPSFNDAVQRALVVGDYKGAVAQCIAADKMADALVIAQVGGQSLWETT
RDEYLKKNRSPYLKVVSAMVNNDLVSLVNIRPLKSWKETLALLCTFAQKEEWTLLCDILA
SRLVKAGNTLAATLCYICAGNIDKTVEIWSKNVTAEHIGESYVGLLQDLMEKTVVLALAT
GQKRFSASLCKLVEKYAEILASQGLLTTAMEYLKLMGTEDLSPELAILRERIALSSQPEK
EATGSTEFVHSQPQVPPVYDANHEANSIVDSSRSYYQPESTYQRESYQQPHGPVYNTPYQ
QTHQPSMFVPSSTANVPPVATFNPSPVTTQPTPKVFVPTTPPIMRNADQYQQAPTLGSQL
YPSQGNANSGYQPGPPGPVSVGPVPSPMVPTIGPKISQGVTPPVRGFMPLNNTGLQRTSS
AQMQPPTPQPAAPPAAPPTVQTADVTNVPAQQKPVIGTLTRLLNETSEALGGSNAVPAKK
REIDDNSKKLGALFAKLNSGDISKNAAEKLVQLCQCLDRGDFPTALKIQVDLTTSDWDEC
SFWLATLKRMIKIRQNIR
NT seq 3297 nt   +upstreamnt  +downstreamnt
atggatacatccgcctgtataaaagaggtaaacagatcggcatcggtggcatttgccccc
gatgccccgtacatcgcagccggaacaatggctggagctgttgacatgtcattcagctca
tctgcaaatcttgaaattttcaaacttgatttccaatctgatgatcataatcttccttta
gttggttctattcctagctctgaaccctttaatcgattatcttggggcaaatcccccctg
cccagttccgaagaattcggattgggtcttgttgctggtggtcttgttgatggtaatatt
ggtatctggaatcccaagatacttataagctctgaagataataaaagtgctcttatccaa
caactatcaaaacacaaaggacctgttcgtggtcttgagtttagcggtctctcaccaaac
catcttgcttctggcgctgaagaaggggaaatatgtatatgggatatctctaaaccatca
gaacctacacattttcctccacttaagggaagtgcgtcagctaaacagagtgaaatatct
tatttatcatggaacagaaaggttcagccaatcttggcatccacttccgtcaatgggaca
actgtggtttgggacctcaggaagcaaaaaccgattattagtttctcagattcagttaga
agacgatgctctgttttacagtggcatcctgattttgccacacagctgattgttgcttca
gatgatgatacctcgccttctttgaggatgtgggatatgcgaaacacaatgtcaccattg
cgagagttagtaggtcacgataaaggtgtagttgcaatgtcgtggtgtcccaatgacagc
tcctatttgctgacctgtgccaaagataaccgcactatttgttgggacactaattctgct
gcgattgtttctgaacttccagctggaaccaattggaactttgatgttcattggtatcca
aagatacctgggatcatatctgcatcttcctttgatggaaaaattggcatttataatatt
gaggcctgtgctcgatatggtgctggggaaaattactatagctcagcacctttgaaagcc
ccaaaatggtaccaacgtaaagctggagtttcttttggttttgggggcaagcttgtttct
ttccattcaactggttcttctggaccttcagaggtcaatgttcatgatttggttactgaa
cacaatttagtaagtacctcatctgaatttgaagaggcaatgcgaagcggagatagatct
tctttcagagttctatgtgacaacaaatctcaacaatctgaatccgaggaggaaagagaa
acatggggatttttgaaggtgatgtttgaggatgaaggaacagcaaggacaaagctttta
aaccaccttggctttactttgcctgcagaagtgaatgataatgttcaagaactatctcat
gatgtaaactctctcaattttgaagaacatgaagcaaagaaagaagagtttacaggaggc
aacctaacacctattgataacggggaagatttctttaacaatcttccaagtcctaaatgt
gacacacctgtctcgactccggggaaaaataccgaagaatctgttccctttgtggatgaa
caaacaatggaaagtgatttacacggtggccacactgacccgtcatttaatgacgctgtg
caacgtgcattggttgttggagattacaagggtgcggttgcccagtgtattgcagcagat
aagatggcagatgctttagttattgcacaggttgggggtcagtccttgtgggagaccaca
cgtgatgaataccttaagaagaaccgttctccctacctaaaggttgtttctgcaatggtg
aacaatgatctggttagtctagttaatatccgaccactgaaatcttggaaggaaacactt
gctctcctatgcacttttgcacaaaaagaggaatggactttactttgtgatatccttgct
tctcggctagtaaaagctggtaatactctagcggcaactctttgttacatatgtgctggg
aacattgataaaacagtcgaaatctggtccaagaatgttaccgcagaacacattggagaa
tcgtatgttggccttcttcaggatttaatggagaagactgtggttcttgctctagcaacg
ggccagaagagattcagtgcttctttatgcaagcttgttgagaagtatgctgagatatta
gcaagtcaaggacttttgacaactgctatggaatatttgaagctaatgggaacagaagat
ttgtctcctgaacttgccatcttaagagaacggattgctctctcatctcaaccagagaaa
gaggcaacagggtctacagaatttgttcactctcaacctcaagtgccacctgtatatgat
gcaaaccacgaagcaaactctattgttgattcttctagaagctattatcagcctgagagc
acttatcaacgtgagagctatcaacaaccacatggccctgtatacaacacaccatatcaa
cagacacatcaaccttctatgtttgtgccatcttccacggcgaacgttcccccggtggcg
acattcaatccatctccggttacaactcagcctactcccaaagtctttgttcctacaaca
ccaccgattatgagaaatgcggatcaataccagcaggcaccgactttgggttcacaacta
tatccttctcaggggaatgctaactctggctaccaacctggacccccgggacctgtttca
gttggtccagtcccatctcccatggttccaactatcgggccaaagatatcacagggtgtg
accccaccagtgaggggatttatgcctttaaacaatacaggattgcaaagaacttcctca
gctcaaatgcaacctcctactccacaacctgctgcacctcctgcagctcctccaactgta
cagacagctgatgtgacgaatgtaccagcccaacaaaagccagttattggaactttgact
agacttctgaacgagacatcagaagcattgggaggttcaaatgccgttccagctaagaag
cgtgagattgatgataactcgaaaaaactcggtgccttgtttgccaaactaaatagcggc
gatatatccaaaaatgccgctgaaaagcttgtgcagctctgtcaatgcttggatcgtggt
gactttcctactgccctcaaaatccaggtggatcttaccacaagtgactgggatgagtgc
agtttctggttagcaactctgaaacgaatgatcaagattaggcaaaatatcagataa

DBGET integrated database retrieval system