Erigeron canadensis (horseweed): 122595193
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Entry
122595193 CDS
T07610
Name
(RefSeq) threonine--tRNA ligase, mitochondrial 1-like
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122595193
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ecad01007
]
122595193
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecad03016
]
122595193
Enzymes [BR:
ecad01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
122595193
Amino acid related enzymes [BR:
ecad01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
122595193
Transfer RNA biogenesis [BR:
ecad03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
122595193
Prokaryotic type
122595193
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
tRNA-synt_His
Motif
Other DBs
NCBI-GeneID:
122595193
NCBI-ProteinID:
XP_043623458
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Position
4:complement(2726338..2734553)
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AA seq
729 aa
AA seq
DB search
MLCAQNIIRRISNNNFRRSQPPITTVLRSLHLPSSPPSTMGKAVNPASKSASKSAVSIVK
DDAYLDSVIPKRIELFETLKAQQIAHRQSISGDPIKIKLPDGTVKEGKKWETTPLDIAKE
LSKSLASNALISQVDGVLWDMSRPLEGDCELKIFTFDSDEGRDTFWHSSAHILGQALEMT
YGCKLCIGPCTTRGEGFYYDGFYGELGLNDDHFDQIVDGAKKAVAEKQPFERIEVSRKQA
LEMFSDNKFKVEIISDLPEDKTITVYRCGPLVDLCRGPHIPNTAFVKAIACLKASAAYWR
GNKDRESLQRVYGISYPDQKRLKEYIALLEEAKKYDHRELGKKQELFFFHPLSPGSCFFL
PHGARVTEKLMTFIKTEYRRRGYLEVTTPNMYNMQLWETSGHAANYKENMFVFDIEKQEF
GLKPMNCPGHCLMFDYRVRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIF
CRESQIKDEVKSVLEFIDYAYHVFGFTYELKLSTRPEKYLGDLETWDKAEKALEGALNEF
GKPWQINEADGAFYGPKIDISVSDAMKRKFQCATLQLDFQLPQRFNLSYSAEDETKRERP
VMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSDKSQTYGQQVKDQIDEAGY
YVDIDTSDRTIQKKVREAQLAQYNYILVVGEEEANTGKVSVRVRDKQEHLVQTIPDLLKH
FKEEVQAFH
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctatgtgcccaaaatatcatccggcgaatctcaaataacaacttccgccgttctcag
ccgccaatcaccactgttctacgctctctacacttgccgtcatctccgccgtcaaccatg
ggaaaagcagtgaatcctgcttcaaaatcagcctcaaaatctgcagtttcaatagtcaaa
gatgatgcttatcttgattctgttatcccaaaaagaatcgaactttttgaaaccctaaaa
gctcaacagattgctcatcgccagtccatttccggtgaccccatcaagatcaagttacct
gatggaactgtgaaagagggaaaaaagtgggaaacaactccattagatatagcaaaagag
ttatcaaagagtctagcatcaaacgctttgatatctcaagtagatggagtattgtgggac
atgtcaaggccgttagaaggtgattgcgaacttaaaattttcactttcgatagcgatgag
ggtcgtgacactttttggcattcgagtgcccatattcttgggcaggctttagaaatgaca
tatggatgtaaattgtgtatcgggccatgtactacaagaggagagggtttctactatgac
ggtttctatggtgaactcggattaaacgatgatcactttgatcaaattgttgatggagct
aagaaagctgttgcggagaagcaaccttttgagcgaattgaagtttcacgaaagcaggcc
cttgagatgttttctgataataagtttaaggttgagatcattagcgacctacctgaagac
aagaccatcacagtttacagatgtggtccattagttgatttgtgccgtggaccgcatata
ccaaatactgcatttgtcaaagcaattgcttgcttaaaggcttcggcagcttactggagg
ggaaacaaagaccgtgagagcttacaaagagtttatgggatatcttatcctgaccaaaaa
cgtctaaaggaatacattgctctgctagaagaagccaaaaagtatgaccacagagagttg
ggcaagaagcaggaacttttcttttttcacccacttagtccaggaagttgtttctttctt
cctcatggggcccgggtaactgagaaattgatgacatttataaaaacagagtatcgtaga
agaggttacctagaggttacaacaccgaatatgtacaacatgcaactgtgggaaacttca
ggtcatgctgcgaattacaaggagaacatgtttgtatttgatatagaaaagcaggagttt
gggctcaagccaatgaattgtccaggacattgcttgatgtttgattacagagtgcgttct
tatagggaactaccgcttcgattagctgacttcggagttctgcatcgtaatgaagccagt
ggtgcattgacaggtttgactcgtgttcgaaggtttcagcaggatgacgctcatattttt
tgtagagaatcccagataaaggatgaagtaaagagcgtgttggaattcatcgattacgcg
tatcatgtatttggtttcacctatgaactaaaactatcaacaaggccggaaaagtatcta
ggagatctggaaacatgggacaaagctgagaaagcacttgaaggtgcattgaacgagttt
gggaagccatggcagatcaatgaagctgatggggcattttacgggccaaaaattgatata
tctgtttcagatgcgatgaaaagaaaatttcagtgtgcgaccttgcagttggactttcaa
cttccccagagattcaatttgtcgtattcagcagaagatgagaccaaaagagagagacct
gtgatgatacaccgagctattttaggatcagttgaacgcatgtttgctatactgttggag
cattataaggggaaatggccattttggctgagtccccgtcaagcaatcgtttgccctgta
tctgacaagtcccaaacttatggacaacaggttaaggatcagattgatgaagccggctat
tatgtagacattgatacctctgatcgaacaatccagaaaaaggtacgtgaagctcaactg
gctcaatacaactacattcttgttgttggtgaagaagaagccaacactggaaaggttagt
gtccgtgtgagagacaagcaagaacatttggtgcagaccattccagatctcctaaaacat
ttcaaggaagaagtgcaagcttttcattag
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