Erigeron canadensis (horseweed): 122595240
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Entry
122595240 CDS
T07610
Name
(RefSeq) transcription activator GLK1-like
KO
K28172
GARP family transcription factor, GLK subfamily
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecad03000
]
122595240
Transcription factors [BR:
ecad03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
122595240
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
122595240
NCBI-ProteinID:
XP_043623508
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All DBs
Position
4:9076068..9082850
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AA seq
430 aa
AA seq
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MLAVMSPLGNNNNTNTNTNKTSRDERCEMIGFSVGEVEFPDFSDDNLIESIDFDDLFVGM
DEGAADMMLPDLEMDPELLASAAGDFSLSGDGEDSNSSNHQFNNNTSVDSVSVYGVDEYI
STKQEQVAAAAEDVNIRDGSSCRNNNPSRKDTDETDIGGGRKSSSTSSKNNSSQGKRKVK
VDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIGCLTRHNIASHLQKYRSHRKHLLARE
AEAASWSQRRQMYTPTTARTTTGGGGKGNWVAPITPTMGFPPHYRPLHVWGHPSMDRPLM
PMWSKHTPNSPHVWPPTWHPHHQRPPYLPQILPQTRFPSSHVQVPCIPPSHSMYKTDTNI
SVSTPSTGQSCPQPVLDLHPSTETIDDAIGEILSKPWQPLPLGLKPPALDSVMVELQRQG
IQKVPPPTCF
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgttagctgtgatgtcacctttaggaaacaacaacaacaccaacaccaacaccaacaaa
acaagtagagatgagagatgtgagatgattgggttttcagtgggagaagtagaatttccg
gatttctcggatgataatctgattgaaagtatcgattttgatgatttatttgtggggatg
gatgagggggcggccgacatgatgttgcctgatttggaaatggaccccgaactccttgcc
tcggccgcgggggatttctctcttagtggcgacggagaagattccaattcgtctaatcat
cagtttaataacaacacgagtgtcgatagtgttagtgtttacggtgttgatgaatacata
tcaacaaaacaagaacaagtagcagccgcagcagaggatgtgaatataagagatggaagc
agctgcaggaataataatccgagccgaaaggatacagacgaaaccgatataggtggagga
cgtaaatcttcttctacttcatccaagaataattcatctcaagggaagagaaaagtaaag
gttgactggacacctgagttacatcggagattcgttcaagcggtggaacagttgggggtg
gataaggcagtcccttcaagaatccttgagattatgggtattggttgtcttactcgccat
aacattgctagccatcttcagaaatataggtctcacagaaaacatttgcttgcgagagaa
gcagaggcggcgagttggagccaaagacgtcaaatgtatacaccaacgacagcaagaaca
acaacaggaggaggaggcaagggaaactgggttgcaccaataacaccaactatgggcttc
cctcctcattataggccattacatgtatgggggcacccctccatggatcgacctttgatg
cctatgtggtcaaaacacacccctaactcaccacatgtttggccaccaacatggcatcct
catcatcaaagaccaccgtaccttccacaaattttaccacaaacgagatttccatcttcc
catgtacaagtcccatgtatcccaccatcacactctatgtacaaaacagacaccaacata
agcgtttccactccttccactggacaatcttgcccgcaaccagtgttagatctacatcct
tctacagagacaattgatgatgcaataggagaaatattatcaaagccatggcagcctctc
ccacttggactaaaaccgccagcgcttgatagtgttatggtagaattacaaagacaggga
atccaaaaagtacctcctcctacatgcttttga
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