Erigeron canadensis (horseweed): 122595245
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Entry
122595245 CDS
T07610
Name
(RefSeq) probable CoA ligase CCL6
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00061
Fatty acid biosynthesis
ecad00071
Fatty acid degradation
ecad01100
Metabolic pathways
ecad01212
Fatty acid metabolism
ecad04146
Peroxisome
Module
ecad_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
122595245
00071 Fatty acid degradation
122595245
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
122595245
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ecad01004
]
122595245
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecad04147
]
122595245
Enzymes [BR:
ecad01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
122595245
Lipid biosynthesis proteins [BR:
ecad01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
122595245
Exosome [BR:
ecad04147
]
Exosomal proteins
Exosomal proteins of breast milk
122595245
Exosomal proteins of breast cancer cells
122595245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-GeneID:
122595245
NCBI-ProteinID:
XP_043623515
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Position
4:complement(35181525..35187332)
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AA seq
659 aa
AA seq
DB search
MSVYTVKVEDSRAADGQTPSAGPVYRCIYAKDGLMDLPPGYDSPWDFFSESVKRNPKNPA
LGRRQIIDGKAGGYSWLSYQDAYNSALRIASAIRSRSVNPGDRCGIYGPNCPEWIISMEA
CNSNGITYVPLYDTLGANAVEYIINHAEISLVFVQENKLPAILSCLPKCSSNLKTIVSFG
KFSESQKKEAEEQGVDCFSWEDFSLMGSLEDELPAKNKTDICTIMYTSGTTGEPKGVILT
NSAFMSEVLSMHQLLVETDKPGTEEDTYFSFLPLAHIFDQIVETYCIYSGSSIGFWQGDI
RYLIEDLLVLKPTIFCGVPRVYDRIYTGIMAKISAGGAVRKALFDFAYNYKLWNLEKGIQ
QDKSAPLLDKLVFDKIKQGFGGRVRLMLSGAAPLPRHVEEFLRVTCCTVLSQGYGLTESC
GGCFTSIANVYSMIGTVGVPMTTIEARLESVTDMGYDALGSVPRGEICLRGNTLFSGYHK
REDLTKAVLVDGWFHTGDIGEWQADGAMKIIDRKKNIFKLSQGEYVAIESIESIYSRCPL
VTSIWVYGNSFESFLVAVVVPDRMAIEEWAAKNNESGDYVSLCKNSNARKYVLDELNSEA
QNNKLRGFEMLKAVHLEPLPFDFERDLITPTFKLKRQQLLKYYKDSIDQLYTEAKSSKK
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtttacactgttaaagttgaggattcaagggcggccgacggacaaaccccgtca
gccggcccggtttataggtgcatttatgccaaggatggtctcatggacttgcctcctggt
tatgattctccttgggactttttcagtgagtccgttaaaagaaacccgaagaaccctgcg
cttggtcgacgtcaaatcatcgatgggaaggctggtggctattcatggttatcatatcaa
gatgcttacaattctgctttacgtattgcctcagccattcgaagtcgatctgttaatcct
ggagacaggtgcggtatatatggacctaactgtcctgaatggatcatttctatggaggct
tgtaacagcaatggcataacatatgtacctttatatgatacacttggtgctaacgcggtc
gagtacatcatcaaccatgcagaaatttcgttagtttttgttcaagagaacaagttgcct
gcgatcttatcgtgtcttccaaagtgctcatccaatctgaaaactatcgtcagctttggg
aagttctctgaatcacaaaagaaggaagcagaggaacaaggtgttgattgcttctcatgg
gaagatttttctttaatgggaagtttggaagatgaactacctgcaaaaaataagactgac
atttgcacaataatgtacacaagtggaacaaccggagaaccaaagggtgtcatactaact
aacagtgctttcatgtcagaagtcttgtcgatgcatcaactacttgttgaaacagataaa
cctggcacagaagaagatacatacttctcatttcttcctttggcacatatatttgatcag
atagttgagacatattgcatttacagtggttcctcgattgggttttggcaaggagatatt
agatatttgattgaggaccttcttgtgttgaaaccaaccatattttgtggtgttccaaga
gtttatgaccgcatttatactggtataatggcgaagatttcagctgggggtgctgtaagg
aaggcattatttgattttgcatacaactataaattgtggaaccttgaaaagggaatacaa
caagacaaatcagccccacttttggacaagcttgtcttcgataaaattaaacaagggttc
ggaggaagggttcgtcttatgttatctggtgctgcgcctttgcctagacatgttgaagaa
tttttgcgagtgacatgttgtactgtcctctcgcaaggatatggacttactgaaagttgt
ggtggatgctttacatccatagcaaacgtgtactctatgatcggaactgtgggtgtaccc
atgacaaccatcgaggcaaggcttgagtctgtaacagatatgggttacgatgcacttggt
agtgtgccacgtggggaaatttgtctaaggggaaacacactattttctgggtaccacaag
cgagaggatcttactaaggctgtccttgttgatggctggttccatacaggtgatattggg
gaatggcaggccgacggggcaatgaaaatcattgacaggaaaaagaatatattcaagttg
tcccaaggggagtatgttgcaattgaaagcatcgaaagtatctattcacggtgtcctttg
gtaacctcgatttgggtgtatggcaatagttttgaatctttccttgtggcggttgtggtg
cccgatagaatggcaatcgaagaatgggcagcaaaaaacaatgaatcaggagattatgta
tcattgtgcaagaactcgaatgctagaaaatatgttctagatgagcttaattctgaagct
caaaataataaacttcgtggattcgagatgctgaaagcagttcatctagagccattacca
tttgacttcgagagggatttaataactccaacatttaaactaaagaggcagcagctccta
aaatactataaggatagcattgatcagttatatactgaagcaaagtcatccaagaaatga
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