Erigeron canadensis (horseweed): 122595253
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Entry
122595253 CDS
T07610
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like
KO
K08775
breast cancer 2 susceptibility protein
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03440
Homologous recombination
ecad03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
122595253
03460 Fanconi anemia pathway
122595253
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122595253
03036 Chromosome and associated proteins [BR:
ecad03036
]
122595253
03400 DNA repair and recombination proteins [BR:
ecad03400
]
122595253
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
122595253
Chromosome and associated proteins [BR:
ecad03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
122595253
DNA repair and recombination proteins [BR:
ecad03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
122595253
FA (Fanconi anemia) pathway
Downstream FA components
122595253
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCA2
BRCA-2_OB1
BRCA-2_helical
BRCA2DBD_OB2
Tower
Motif
Other DBs
NCBI-GeneID:
122595253
NCBI-ProteinID:
XP_043623524
LinkDB
All DBs
Position
4:complement(29541..41696)
Genome browser
AA seq
1374 aa
AA seq
DB search
MFADQHQQHDDDDAFPGFTILDGNQKPGFRTGLGKPVVVKQSSLAKASSILVDQDGGTCI
TDAGHPKLSKNQNGTPPTFRTGLGKPIVVQNSSLTKASSILGDQGGPGYLKPNKNQSGTP
RTFRTELRSPVAVKQSSLTKASFILGDQDGDSVNIGYPKLYENQNTTPPMFRTGSGKPVV
LKQASLAKASIILGEQDGGTSIADAGYPKPYENQSETPSTFRTALGKPVVVKQSSLPKAS
SILGDQDGGICNADTKNPKLYENQGGTPPTFRTGLGKPVVVKKSSLVKASFILGDQDKGE
AGSRDTECMNIHVDNNHKAEAPVTFETGSGKSVATKKSSYEKALSILQDDDDDVFSDWVG
GSVDRDNGTSGLNTMFQTGSGKAVNICSTGLIKARALLGLEENIDCIEASKGHIQLRQHP
NSDDIFTCQSSLRLRNTSDETYSGFQEARSIPNSNCKSRSGVYGNDMKEVAQGSFHSASR
PPPIQFRTAGGRSVKVSSDALKRARSLLGDPDVGNFLNEGHEGSPVVLASTNGSFEDSMN
KEISVCTSSSADVLKAKNMSNGFTTPLRSALSYKKTASRIQNIGLRSNLIKEFDAVEHDI
SIKQCNDLPCSSLPLSANMTPAMEGVKGTLSENGNMLGASSERKSSERPLVDIINIKGSN
LVGTDQVVRAKRKLSSRKYISPFKKPRNSTFVPPLNIKSTAVPNGTVPEALGASCFNNRV
STRYPSQFPRKYIKEYLGEPLFFQNMFKNLPEWLRKISPENVNKHMFDDESGTKSIGLDS
FFHMLSQSGCSTISKEWIANHYRWIVWKLGCYERCYPTKFFGKLLTAYNVLEELKYRYER
EVNNGHRSALKRILEGDAHPSSPLVLCISSIHLKCDSETDTNVFSTSNATESSTVASVEL
TDGWYSVNGLLDELLLKQVVAGKLFVGQKLKVCGASLCGWNAPVSPLEASRTISLCLNIN
GTYRAHWAERLGFCKSGCAPLALKCIKGSGGVVPSTLVGVTRIYPVLYRERLSDGGFVVR
SERMENKRVQLYDQRRSSIVEGVMSEFQRGLKSFQVHDGENSDDEGAKIFQLLEEAAEPE
FLMADMTYKQLNSFVKYKEKIEAIRESEMQKLIEKALDEAGLRRREVNTFMRARVVGLTS
RSNNQKSCSRQGMVTIWNPSEEQQSELVEGQAYVVAGLSPVHSNSNIIYLHGGSTTKWQP
LSLSTIGQFQPFFSARKSVSLLKMDEIPLSSEFDVAAFVIYVGEVHKSTHHKKQWVFVAD
GSINTSHSHDQSDTLLAISFCSPAVDCDSIVPINYNLVGSTVGFCNLIKCDKDHTNRIRV
AEATENSTYHLSYDASVSKHLKNAAVSADRWAKASTLTIEKLKRKVLSILACKI
NT seq
4125 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcagaccaacaccaacaacatgatgatgatgatgcttttccaggatttacaata
ctagatgggaatcaaaaaccgggattcagaactggattggggaaaccggttgttgtaaag
caatcttctttagccaaagcatcatctattcttgtcgatcaagatggaggcacatgcatt
acagatgcaggacatccgaaattatctaagaaccaaaatgggacccctccgacatttaga
actggattggggaaaccaattgttgtgcagaattcttccttaacgaaagcatcatctatt
cttggcgatcaaggaggaccaggatatctgaaacctaataagaatcaaagtgggacccct
aggacatttagaactgaattaagaagcccagttgctgtaaagcaatcttccttaaccaaa
gcatcatttattcttggtgatcaagatggagactcagtgaatatagggtatccgaaactg
tatgaaaatcaaaataccacccctcccatgttcagaactggttcagggaaacctgttgtc
ttaaaacaagcctctttagccaaagcatcaattattcttggtgaacaagatggaggaaca
agcattgcagatgcagggtatccgaaaccttatgagaatcaaagtgagaccccttcaaca
ttcagaactgcattggggaaaccggttgttgtgaagcaatcttccctgccaaaggcatca
tctattctcggcgatcaagatggaggaatatgcaatgcagacacaaaaaacccaaaactg
tatgagaatcaaggtgggacccccccaacattcagaactggattgggcaaaccggttgtt
gtaaagaaatcttccttggtcaaagcatcatttattctcggcgatcaagacaaaggagaa
gcaggcagcagagatacagaatgtatgaacatacatgtggataacaatcataaagctgag
gctccggtaacatttgagactggatcaggaaaatcggttgccacgaaaaagtcttcctat
gaaaaggcattatctattcttcaagatgatgatgacgatgttttttcagattgggtgggt
ggatcagttgaccgagacaatggaaccagtggcttgaataccatgttccaaacagggtca
gggaaagctgtaaacatatgctctacaggtcttattaaagctcgagcattgttaggactg
gaagaaaatattgattgtattgaggcttccaaaggccacatacaactgagacaacatcca
aattcagatgatatcttcacctgtcaatcttctttgagactccggaataccagtgatgaa
acttattcagggtttcaagaagctagatccattccgaattctaattgtaaatcacgttct
ggtgtatatggaaatgatatgaaggaggttgctcaaggatctttccattctgcttctagg
ccaccacctatccagtttcgtacagctggtggaaggtctgtaaaggtttctagtgatgcc
ttgaaacgagcaaggagccttctaggagatcctgatgtggggaattttttgaatgaagga
catgaaggttctcccgtggttttggcgagtacgaacggtagctttgaggatagcatgaac
aaagaaattagtgtgtgcacttcttccagtgctgatgtactaaaagcgaagaacatgtct
aatggtttcacgaccccattaagatcagctttatcttataagaagactgcaagcagaata
caaaatataggtcttcggagtaatttgatcaaagaattcgatgctgtcgaacatgatatc
agtataaagcagtgtaatgatttaccatgttcctcattgcctttatcagcaaatatgact
cctgctatggagggagtaaaaggaaccctttcagagaatggcaacatgttaggtgcttct
tcagagcgaaagtcttcagaaaggccattggtggatattataaatataaagggttcaaat
cttgttgggactgatcaagtcgtaagagcaaagaggaaactatcaagtcgaaaatatata
tctccattcaagaagccccgcaattctacatttgtccctccattgaacataaaatcaaca
gcagttcccaacggtaccgtgcctgaagctcttggagcatcatgcttcaataacagggtt
tccactcgatacccgtctcagtttccacgcaagtatatcaaggagtaccttggggagcct
ttattctttcaaaacatgttcaagaacttgcctgaatggttaagaaagataagtccagag
aatgtgaacaaacacatgtttgatgatgaatctggtacaaaaagcattggtttggattcc
ttctttcacatgttgtctcaatcaggttgttcaaccatttcaaaagagtggattgcaaat
cattacagatggatagtgtggaaacttggatgttatgagagatgctatcctactaaattt
tttggaaaacttctgactgcttacaacgtgcttgaggaactgaaatatagatacgagaga
gaagttaacaatggtcatagatcggcacttaagagaattctggaaggagatgctcatcct
tcttctcctttggtactttgcatatcatctatacacttgaagtgtgattcagaaaccgat
acaaacgtattttctacatcaaatgctactgaaagctctacagttgccagcgtggaactg
acagatggatggtattcagtgaatggtctcttggatgaattgcttttaaagcaagttgtt
gcgggaaaattgtttgtgggacaaaagcttaaggtctgtggagctagtttatgtggttgg
aatgcacctgtttcaccccttgaggcatcaaggacgattagcttatgcttgaacattaat
gggacatatagagctcattgggcagagcgtttgggattctgcaaaagcggctgtgcccca
ttagcgcttaagtgcattaaaggttctggcggggtagttcccagcacattggttggagtc
actcggatatatcctgttctttacagggaaaggttaagtgatggaggtttcgtggtgaga
tcagagagaatggaaaacaaaagggtgcaattgtatgaccagagacgttcaagcattgtg
gagggcgttatgtccgaatttcaaagggggctcaaaagttttcaagttcacgatggggaa
aattctgatgacgaaggggcaaagatctttcagttacttgaagaagctgccgaaccagaa
tttctaatggctgacatgacctataaacaacttaattcatttgtcaagtataaagaaaaa
attgaggcaattagagagtcagaaatgcaaaaattaattgaaaaggcattagatgaagct
ggcctaagaaggagagaagtcaacacgtttatgagagcgagagtggttggtttgactagt
agaagcaataatcagaagagctgctcacgtcagggcatggtaacaatctggaatccaagt
gaggaacagcaatcagagttggttgaggggcaagcatatgttgttgcgggtctttcacca
gttcactctaattcgaatattatttatttgcatggaggatctacaacaaaatggcagcct
ttatctctgtccacaattggacagtttcagccattttttagtgctcggaaatcagtatca
ttactaaaaatggatgaaattcctctctccagtgagtttgatgttgctgcgtttgttatt
tatgtgggggaagtgcacaaatctactcatcacaagaaacagtgggtttttgtggcagat
ggcagtattaatacatcacattcacatgaccagtcagatactttgcttgcaatcagtttt
tgttcaccagctgttgactgtgattctattgtcccaatcaactacaaccttgttggatca
acggttgggttttgcaatcttataaagtgtgacaaggatcatacaaaccgtatacgggtg
gctgaagcaactgaaaattctacataccatctaagttatgatgcttctgtttccaaacac
ttgaaaaatgctgctgtgtctgctgatcgatgggcaaaagcctccaccctgactattgag
aagctaaagagaaaagtattatctattcttgcctgcaagatatag
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integrated database retrieval system
