Erigeron canadensis (horseweed): 122595253
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Entry
122595253 CDS
T07610
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like
KO
K08775
breast cancer 2 susceptibility protein
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03440
Homologous recombination
ecad03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
122595253
03460 Fanconi anemia pathway
122595253
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122595253
03036 Chromosome and associated proteins [BR:
ecad03036
]
122595253
03400 DNA repair and recombination proteins [BR:
ecad03400
]
122595253
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
122595253
Chromosome and associated proteins [BR:
ecad03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
122595253
DNA repair and recombination proteins [BR:
ecad03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
122595253
FA (Fanconi anemia) pathway
Downstream FA components
122595253
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA2
BRCA-2_OB1
BRCA-2_helical
BRCA2DBD_OB2
Tower
Motif
Other DBs
NCBI-GeneID:
122595253
NCBI-ProteinID:
XP_043623524
LinkDB
All DBs
Position
4:complement(29541..41696)
Genome browser
AA seq
1374 aa
AA seq
DB search
MFADQHQQHDDDDAFPGFTILDGNQKPGFRTGLGKPVVVKQSSLAKASSILVDQDGGTCI
TDAGHPKLSKNQNGTPPTFRTGLGKPIVVQNSSLTKASSILGDQGGPGYLKPNKNQSGTP
RTFRTELRSPVAVKQSSLTKASFILGDQDGDSVNIGYPKLYENQNTTPPMFRTGSGKPVV
LKQASLAKASIILGEQDGGTSIADAGYPKPYENQSETPSTFRTALGKPVVVKQSSLPKAS
SILGDQDGGICNADTKNPKLYENQGGTPPTFRTGLGKPVVVKKSSLVKASFILGDQDKGE
AGSRDTECMNIHVDNNHKAEAPVTFETGSGKSVATKKSSYEKALSILQDDDDDVFSDWVG
GSVDRDNGTSGLNTMFQTGSGKAVNICSTGLIKARALLGLEENIDCIEASKGHIQLRQHP
NSDDIFTCQSSLRLRNTSDETYSGFQEARSIPNSNCKSRSGVYGNDMKEVAQGSFHSASR
PPPIQFRTAGGRSVKVSSDALKRARSLLGDPDVGNFLNEGHEGSPVVLASTNGSFEDSMN
KEISVCTSSSADVLKAKNMSNGFTTPLRSALSYKKTASRIQNIGLRSNLIKEFDAVEHDI
SIKQCNDLPCSSLPLSANMTPAMEGVKGTLSENGNMLGASSERKSSERPLVDIINIKGSN
LVGTDQVVRAKRKLSSRKYISPFKKPRNSTFVPPLNIKSTAVPNGTVPEALGASCFNNRV
STRYPSQFPRKYIKEYLGEPLFFQNMFKNLPEWLRKISPENVNKHMFDDESGTKSIGLDS
FFHMLSQSGCSTISKEWIANHYRWIVWKLGCYERCYPTKFFGKLLTAYNVLEELKYRYER
EVNNGHRSALKRILEGDAHPSSPLVLCISSIHLKCDSETDTNVFSTSNATESSTVASVEL
TDGWYSVNGLLDELLLKQVVAGKLFVGQKLKVCGASLCGWNAPVSPLEASRTISLCLNIN
GTYRAHWAERLGFCKSGCAPLALKCIKGSGGVVPSTLVGVTRIYPVLYRERLSDGGFVVR
SERMENKRVQLYDQRRSSIVEGVMSEFQRGLKSFQVHDGENSDDEGAKIFQLLEEAAEPE
FLMADMTYKQLNSFVKYKEKIEAIRESEMQKLIEKALDEAGLRRREVNTFMRARVVGLTS
RSNNQKSCSRQGMVTIWNPSEEQQSELVEGQAYVVAGLSPVHSNSNIIYLHGGSTTKWQP
LSLSTIGQFQPFFSARKSVSLLKMDEIPLSSEFDVAAFVIYVGEVHKSTHHKKQWVFVAD
GSINTSHSHDQSDTLLAISFCSPAVDCDSIVPINYNLVGSTVGFCNLIKCDKDHTNRIRV
AEATENSTYHLSYDASVSKHLKNAAVSADRWAKASTLTIEKLKRKVLSILACKI
NT seq
4125 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcagaccaacaccaacaacatgatgatgatgatgcttttccaggatttacaata
ctagatgggaatcaaaaaccgggattcagaactggattggggaaaccggttgttgtaaag
caatcttctttagccaaagcatcatctattcttgtcgatcaagatggaggcacatgcatt
acagatgcaggacatccgaaattatctaagaaccaaaatgggacccctccgacatttaga
actggattggggaaaccaattgttgtgcagaattcttccttaacgaaagcatcatctatt
cttggcgatcaaggaggaccaggatatctgaaacctaataagaatcaaagtgggacccct
aggacatttagaactgaattaagaagcccagttgctgtaaagcaatcttccttaaccaaa
gcatcatttattcttggtgatcaagatggagactcagtgaatatagggtatccgaaactg
tatgaaaatcaaaataccacccctcccatgttcagaactggttcagggaaacctgttgtc
ttaaaacaagcctctttagccaaagcatcaattattcttggtgaacaagatggaggaaca
agcattgcagatgcagggtatccgaaaccttatgagaatcaaagtgagaccccttcaaca
ttcagaactgcattggggaaaccggttgttgtgaagcaatcttccctgccaaaggcatca
tctattctcggcgatcaagatggaggaatatgcaatgcagacacaaaaaacccaaaactg
tatgagaatcaaggtgggacccccccaacattcagaactggattgggcaaaccggttgtt
gtaaagaaatcttccttggtcaaagcatcatttattctcggcgatcaagacaaaggagaa
gcaggcagcagagatacagaatgtatgaacatacatgtggataacaatcataaagctgag
gctccggtaacatttgagactggatcaggaaaatcggttgccacgaaaaagtcttcctat
gaaaaggcattatctattcttcaagatgatgatgacgatgttttttcagattgggtgggt
ggatcagttgaccgagacaatggaaccagtggcttgaataccatgttccaaacagggtca
gggaaagctgtaaacatatgctctacaggtcttattaaagctcgagcattgttaggactg
gaagaaaatattgattgtattgaggcttccaaaggccacatacaactgagacaacatcca
aattcagatgatatcttcacctgtcaatcttctttgagactccggaataccagtgatgaa
acttattcagggtttcaagaagctagatccattccgaattctaattgtaaatcacgttct
ggtgtatatggaaatgatatgaaggaggttgctcaaggatctttccattctgcttctagg
ccaccacctatccagtttcgtacagctggtggaaggtctgtaaaggtttctagtgatgcc
ttgaaacgagcaaggagccttctaggagatcctgatgtggggaattttttgaatgaagga
catgaaggttctcccgtggttttggcgagtacgaacggtagctttgaggatagcatgaac
aaagaaattagtgtgtgcacttcttccagtgctgatgtactaaaagcgaagaacatgtct
aatggtttcacgaccccattaagatcagctttatcttataagaagactgcaagcagaata
caaaatataggtcttcggagtaatttgatcaaagaattcgatgctgtcgaacatgatatc
agtataaagcagtgtaatgatttaccatgttcctcattgcctttatcagcaaatatgact
cctgctatggagggagtaaaaggaaccctttcagagaatggcaacatgttaggtgcttct
tcagagcgaaagtcttcagaaaggccattggtggatattataaatataaagggttcaaat
cttgttgggactgatcaagtcgtaagagcaaagaggaaactatcaagtcgaaaatatata
tctccattcaagaagccccgcaattctacatttgtccctccattgaacataaaatcaaca
gcagttcccaacggtaccgtgcctgaagctcttggagcatcatgcttcaataacagggtt
tccactcgatacccgtctcagtttccacgcaagtatatcaaggagtaccttggggagcct
ttattctttcaaaacatgttcaagaacttgcctgaatggttaagaaagataagtccagag
aatgtgaacaaacacatgtttgatgatgaatctggtacaaaaagcattggtttggattcc
ttctttcacatgttgtctcaatcaggttgttcaaccatttcaaaagagtggattgcaaat
cattacagatggatagtgtggaaacttggatgttatgagagatgctatcctactaaattt
tttggaaaacttctgactgcttacaacgtgcttgaggaactgaaatatagatacgagaga
gaagttaacaatggtcatagatcggcacttaagagaattctggaaggagatgctcatcct
tcttctcctttggtactttgcatatcatctatacacttgaagtgtgattcagaaaccgat
acaaacgtattttctacatcaaatgctactgaaagctctacagttgccagcgtggaactg
acagatggatggtattcagtgaatggtctcttggatgaattgcttttaaagcaagttgtt
gcgggaaaattgtttgtgggacaaaagcttaaggtctgtggagctagtttatgtggttgg
aatgcacctgtttcaccccttgaggcatcaaggacgattagcttatgcttgaacattaat
gggacatatagagctcattgggcagagcgtttgggattctgcaaaagcggctgtgcccca
ttagcgcttaagtgcattaaaggttctggcggggtagttcccagcacattggttggagtc
actcggatatatcctgttctttacagggaaaggttaagtgatggaggtttcgtggtgaga
tcagagagaatggaaaacaaaagggtgcaattgtatgaccagagacgttcaagcattgtg
gagggcgttatgtccgaatttcaaagggggctcaaaagttttcaagttcacgatggggaa
aattctgatgacgaaggggcaaagatctttcagttacttgaagaagctgccgaaccagaa
tttctaatggctgacatgacctataaacaacttaattcatttgtcaagtataaagaaaaa
attgaggcaattagagagtcagaaatgcaaaaattaattgaaaaggcattagatgaagct
ggcctaagaaggagagaagtcaacacgtttatgagagcgagagtggttggtttgactagt
agaagcaataatcagaagagctgctcacgtcagggcatggtaacaatctggaatccaagt
gaggaacagcaatcagagttggttgaggggcaagcatatgttgttgcgggtctttcacca
gttcactctaattcgaatattatttatttgcatggaggatctacaacaaaatggcagcct
ttatctctgtccacaattggacagtttcagccattttttagtgctcggaaatcagtatca
ttactaaaaatggatgaaattcctctctccagtgagtttgatgttgctgcgtttgttatt
tatgtgggggaagtgcacaaatctactcatcacaagaaacagtgggtttttgtggcagat
ggcagtattaatacatcacattcacatgaccagtcagatactttgcttgcaatcagtttt
tgttcaccagctgttgactgtgattctattgtcccaatcaactacaaccttgttggatca
acggttgggttttgcaatcttataaagtgtgacaaggatcatacaaaccgtatacgggtg
gctgaagcaactgaaaattctacataccatctaagttatgatgcttctgtttccaaacac
ttgaaaaatgctgctgtgtctgctgatcgatgggcaaaagcctccaccctgactattgag
aagctaaagagaaaagtattatctattcttgcctgcaagatatag
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integrated database retrieval system
