Erigeron canadensis (horseweed): 122595297
Help
Entry
122595297 CDS
T07610
Name
(RefSeq) uncharacterized tRNA/rRNA methyltransferase slr0955
KO
K15507
21S rRNA (GM2251-2'-O)-methyltransferase [EC:2.1.1.-]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ecad03009
]
122595297
Ribosome biogenesis [BR:
ecad03009
]
Eukaryotic type
Other ribosome biogenesis factors
122595297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
SpoU_sub_bind
Motif
Other DBs
NCBI-GeneID:
122595297
NCBI-ProteinID:
XP_043623574
LinkDB
All DBs
Position
4:complement(44207136..44209103)
Genome browser
AA seq
600 aa
AA seq
DB search
MYCNFTKLHTFPIAIRASSQQPKCFLQLYINPKTPKCLPSLIQEKPICCYGVRRFKSTYD
YCSLLVSAKKGTFSNGVCLKSRNFSTFVGRKAVEGSGSTKTFPWLAKNKDKEVKEFERSG
ETRRASWEESAGRFTKDGREKIRRKDFKEKSGNSENGLDSRKAGRSSWEVSAEKFVERGV
GNEDRGRKLDEGNGFRERRNVSGDEPATRKAVRSSWEESAQKVVKSGGESREKGRRFDKR
NDYRERRGVSEDELDVDNEEVDNPSWYKVKERLGGFDKVANVERNGNEFRKWNRQDEFGK
KVWREATESSVPKMVGECVYGVGPVLAALSANRREFYVLYVQEGKVEFSGNNKRKKDKKG
FEKVLRVANKLGLTIKEISKHDLNMVVDSRPHQGLVLDASPLEMVNIRELDRVVTDGEEG
APLWLALDEVMDPQNLGAIMRSAYFFGAAGVVLCAKNSAPLSGVVSKASAGSLEMTELRS
CKNMMQFLISSAENGWRVVGGSVSSRAVTLNEVTPGEPTILVLGSEGTGLRPLVERSCTQ
LVKIPGNSPVHVGAGLDDADTEEFQSFLAVESLNVSVAAGVLLHHLVGAKNTKTALDVEL
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgtactgtaattttacaaagttgcatacattccctattgccattagagcttcatcacaa
caacccaaatgttttttacagttatacattaatcccaaaacccctaaatgtttacctagt
ttaattcaagaaaaacccatttgttgttatggggttaggaggtttaaaagtacttatgat
tattgtagcttattagtgtctgcgaaaaaaggaaccttttcaaatggggtttgtttaaaa
tcaagaaatttttcgacttttgttggtcggaaagcggttgaaggtagtggttcaacaaaa
acgtttccttggttagctaagaataaagataaggaagtaaaggaatttgagaggtcgggt
gagacgaggcgggcttcttgggaggagtctgcggggaggtttacgaaagatggtagggaa
aagattaggagaaaagattttaaagagaaaagtgggaattcagaaaatgggttggattcg
agaaaggcaggtcggtcttcttgggaggtttcagctgaaaagtttgtggaaaggggtgtt
ggaaatgaggatagaggtaggaaactagatgaaggaaatggttttagggaaagaaggaat
gtttctggagatgaaccagccacaagaaaggccgttcggtcttcttgggaggaatcagct
caaaaggttgtgaaaagtggtggtgagagtagggaaaagggtaggaggtttgataaacga
aatgattatagagaaagaaggggggtttctgaagacgagttggatgtagataatgaagaa
gttgataatccaagttggtataaggttaaagaacggcttggtgggtttgacaaggtcgct
aatgtggaaagaaatggtaatgagtttcgtaagtggaataggcaagatgaatttgggaag
aaggtatggagagaagcaaccgagtctagcgtaccgaaaatggttggtgaatgtgtctat
ggagtcggccctgtgctagctgcgttatcagcaaaccgaagagaattttatgttttatat
gttcaagaagggaaggttgaatttagtggaaataataagaggaagaaggataaaaaaggg
ttcgagaaagttttgagggttgccaataaactgggattaacaataaaagagatatcaaaa
cacgatcttaacatggttgttgatagccggcctcatcagggtctggttcttgatgcttca
cctttagaaatggtgaatatacgtgaactggatcgtgtagtgactgatggagaagaaggt
gcacctctttggttagctttggacgaagttatggatcctcaaaacttaggtgctataatg
aggtcagcatattttttcggtgcagcaggggttgtactttgtgcaaagaactctgcacca
cttagtggggttgtaagtaaagcaagtgctggttcacttgagatgaccgagctacggtct
tgtaaaaatatgatgcagttcttgatttcttccgcagaaaatggttggagggttgttggt
ggttcggtttcttcacgggccgtgactttgaatgaggtgacacctggtgagcccacaatc
cttgtattgggcagtgaaggtaccggtttaagaccattggtcgagaggtcgtgtactcaa
ttggttaaaattccagggaatagtccagtacatgtaggtgcagggttagatgatgccgac
acggaggagtttcagtctttccttgctgtcgaaagtttgaatgttagtgttgctgccggt
gtgcttcttcatcacttggttggagccaagaacaccaagactgcacttgatgttgagtta
taa
DBGET
integrated database retrieval system
