Erigeron canadensis (horseweed): 122595318
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Entry
122595318 CDS
T07610
Name
(RefSeq) pectinesterase-like
KO
K01051
pectinesterase [EC:
3.1.1.11
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00040
Pentose and glucuronate interconversions
ecad01100
Metabolic pathways
Module
ecad_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122595318
Enzymes [BR:
ecad01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
122595318
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GFIT
Motif
Pfam:
Pectinesterase
PMEI
DUF6511
PDE4_UCR
DUF5856
RNF34L-like_3rd
DUF6550
Motif
Other DBs
NCBI-GeneID:
122595318
NCBI-ProteinID:
XP_043623597
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Position
4:42620331..42623039
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AA seq
579 aa
AA seq
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MMIKHFFARMSDSSKKKKIFLTVFSSILVVSAIIGIVVGVNSHSSNNANNSRASISHDIV
KSSCSVTLHPDLCYSTLSSVPELTKKVKSQKDVIELSVNKTKEIIERNYFTIKKLTLKTD
LTKREKIALHDCLEMVADTLEEINEIISILETYQTKKGIQKHVDDILTLMSTTLTNQETC
IDGFSHDKHDKHLRESLIAGEIHAEKLCSNSLAMIKNMTLTDMAANNKAAESNGRKLIQD
ENIIENVEWPEWLSAGDRRLLQSGTVTPNVVVAADGSGDFTTVSAAVAAAPSSSTRYVIR
IAAGVYRENVDIPSGKRNLMFLGSGRTSTIITGSRSVAGGSTTFNSATVAAVGAGFLARD
LTFQNTAGPSGNQAVALRVGSDLSAFYQCDMIAYQDTLYVHSNRQFYINCYIAGTVDFIF
GNAAVVFQDCDIHARRPNPNQRNMVTAQGRSDPNQNTGIVIQKSRIGATSDLRPVQGSFP
TYLGRPWREYSRTVVMQSAISDVINPAGWFPWNGNFALDTLFYGEYQNTGAGASTANRVT
WRGYRVITSATEAQGFTPGSFIGGGNWLRATGFPFSLGL
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgatgatcaaacacttttttgccagaatgtcggattctagcaagaagaaaaagatcttt
ttgacggttttttcttctatccttgttgtctctgctattatcggaattgtagtgggagtt
aattcccacagctccaataatgccaataatagcagagcgtccatatctcatgatattgtc
aaatcatcatgtagcgtaaccctccaccccgatctatgctactctacgctatctagcgtc
ccagagttgaccaaaaaagtcaaaagtcaaaaagacgttatcgagctttctgtcaacaaa
accaaggagataatcgaaagaaactacttcaccataaagaagctcacactgaaaaccgat
ctcacaaaacgtgagaaaatcgcgctccacgattgtctagaaatggtagccgatacacta
gaagaaatcaatgaaatcattagcattcttgaaacgtaccaaaccaaaaaagggattcaa
aaacatgtagatgatatattgacacttatgagcacaactttaaccaaccaagaaacatgc
atagacggattctcccacgataaacacgataagcatttgcgagaatcgcttattgcagga
gagatccatgcagagaagttgtgtagcaattccttagccatgatcaagaacatgacattg
acagatatggcggctaacaacaaagccgccgagagtaatgggagaaagttaattcaggac
gagaatattattgaaaacgttgagtggccggaatggttgtccgcgggagacaggagattg
ttacagtcagggactgtgacacctaatgtggttgtggccgcagacggcagtggagacttt
acgacagtttctgctgctgttgcggccgctccatcttcaagtacaagatatgttattagg
atagcagcaggggtgtatagagaaaatgtggatatcccgagtggtaaaaggaacttgatg
tttctgggttcaggcaggacttccacaataatcaccgggagtcgaagtgttgccggtgga
agcaccaccttcaattccgccactgtcgcggcggtgggtgctggattcctagcacgtgac
ctaacgttccaaaacacagccgggccatcaggaaaccaagctgtggcgttacgggtcggg
tcggatctatcagcattttaccaatgtgacatgatagcgtaccaagatacgttgtacgtc
cattcaaaccgtcaattttacatcaattgttacatagctggcacggttgattttattttt
ggcaatgccgcggtcgtgtttcaagattgtgacatccatgcccgtcgacccaacccaaac
caaaggaacatggtcacggctcaaggcagaagtgacccaaatcaaaataccggaatcgtg
atacaaaaatcaagaataggagccacctctgaccttagaccggtccaaggaagctttcca
acatatttggggaggccgtggagggaatactcgagaacggttgtgatgcaatcggcgata
agtgatgttataaaccccgcgggttggtttccttggaatggtaattttgcacttgataca
ttgttttatggagagtatcaaaacacgggggctggtgcaagtaccgcgaatagagtgacg
tggagagggtatagggtgattacgagtgctacggaagctcaaggttttacacccggaagc
tttattggtggaggtaattggttacgagccacgggcttccctttctctcttgggttgtga
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