Erigeron canadensis (horseweed): 122595513
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Entry
122595513 CDS
T07610
Name
(RefSeq) light-mediated development protein DET1 isoform X1
KO
K10571
de-etiolated-1
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122595513
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122595513
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
122595513
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Det1
RhoGEF
Motif
Other DBs
NCBI-GeneID:
122595513
NCBI-ProteinID:
XP_043623817
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All DBs
Position
4:complement(41027793..41035295)
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AA seq
536 aa
AA seq
DB search
MFRSNNITARLFERQIHTPAPGTTVHRARRFYENIVPGSTIYDVECPDHSFRKFTEDGKY
LISFSRNHQDLIVYRPTWLSFSCKQEDCETQDLPVKAKKFESFFTQLYSVPLATASELIC
KDFFLYVETNQFGLFATSTAQIYDAPATGGAIQGVPSIEKITFHLLRLEDGAILDARVFC
NDYINLAHSMGVFLFEDLLAIVSLRYQHIHILQIRDSGSLVDVRAIGEFCHEDDELFINS
SAQTISNIDKSQSQHMPMNHAMNAPNLEPPAQENPFLSGIKQRLLSFIVRGIRNEETDET
MRIQSLKKKFYFHFQDYVDLIIWKVQFLDRHHLLIKFGSVDGAVSRNADNHPAFFAVYNM
ESTEIIAFYQMSSDELYMLFEQFCDHFHVPSKNTPYMNFISSHSNNIHALEQLRSSKNKA
TSFSLFVKKVMASLPFNCQSQSPSPYFDQSLFRFDEKLISAADRHRQSTDHPIKFILRRP
PHTLKFKIKPGPEAGITDCRTKRISSFLFHPVLPLALSVQQTLFLQPAFVNIHFRR
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgtttagaagcaacaatataactgcaaggttatttgagcgtcagattcacactcctgct
cctggtaccactgttcaccgagccagaaggttttatgaaaatatagttccaggatccaca
atatatgatgttgaatgtcctgaccattcgttccggaagttcacagaagatggaaagtac
ttaataagcttcagtagaaatcatcaggatttgattgtctacagaccgacgtggttatcg
ttttcttgcaaacaagaagattgtgaaactcaagatcttccagtaaaagcaaagaagttt
gaaagtttcttcactcaattgtactctgtgcctcttgctactgcaagtgagctcatatgt
aaagacttcttcctttatgtggagactaaccaatttggactctttgcaacgtcaactgca
caaatctatgatgcccctgctactggaggcgctattcagggtgttccctccattgaaaaa
ataacatttcatcttctgagattggaggatggagctatccttgatgctagggttttttgc
aatgattacatcaatttagcacatagcatgggtgtttttttatttgaagatttactcgca
atagtctctcttcgttatcagcatattcacatacttcagattagggattctggcagtctt
gttgatgtaagggcaatcggggaattttgtcatgaagatgatgaactttttattaattcc
agtgcccagaccatttcaaatattgacaaaagtcaatcacaacacatgcccatgaatcat
gctatgaatgccccaaatcttgaaccgccagctcaagaaaaccctttcctgagtggtata
aagcaaagattgctttcttttatagtccgggggatacgtaatgaagaaacagatgaaact
atgagaattcaatcccttaagaagaagttttattttcactttcaagattatgttgacttg
attatatggaaggtgcaatttctggaccggcatcacttactaatcaagtttggaagtgtt
gatggagcagtgtcccgaaatgctgataaccaccctgcattttttgctgtatataacatg
gaatcaacagaaattattgccttttatcagatgtcctcggatgagctctatatgttgttt
gaacagttttgtgatcatttccatgtaccgtccaaaaataccccatatatgaattttata
tcctctcactcaaataacattcatgctctcgagcaattgagaagcagtaaaaataaagct
acaagcttttctttgtttgttaagaaagtgatggcctctttgccatttaattgtcagtct
cagagtccttcaccctattttgatcagtctctatttagatttgatgaaaagcttatttct
gcagctgatcgtcatagacagtcgactgaccatccaatcaagtttatcttacgaaggcct
ccacatacccttaagttcaaaattaagccaggacccgaagctggcattacagattgcagg
acgaagaggatatcttcatttctttttcatccagttttgccccttgctctttcagttcag
cagactctgtttttgcagcctgcttttgttaatattcacttccgtagatag
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