Erigeron canadensis (horseweed): 122595560
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Entry
122595560 CDS
T07610
Name
(RefSeq) RNA-binding KH domain-containing protein RCF3-like
KO
K21444
poly(rC)-binding protein 3/4
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecad03019
]
122595560
Messenger RNA biogenesis [BR:
ecad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
122595560
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
122595560
NCBI-ProteinID:
XP_043623876
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Position
4:complement(31684503..31689408)
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AA seq
522 aa
AA seq
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MAGQRNDYANRSHYQPDFPESEGGKRTNPSDERESHGIGPEDTVYRYLCPGRKVGSIIGR
GGEIVKQMRSETQAKIRISNSVPGCEERVVIIYSSSEESNNFADSDDLVSPALDALFKVH
DRVIAEEAPPVEDEYDEVQQVTVRMLVPSDQIGCVIGKGGQVVQNIRSETGAHIRILSGE
HLPNCALNSDELLQVSGDTIVVRNALYQLASCLHDNPSRSQHLLLSSSNLYRASGGYMGP
NHGAPPMGVVSLMGPYGSYKNDGGLIVKEFSLRFVCPPENIGAVIGKGGAIIKQIRQDSG
AYIKVDSSAAEGDDCLITVSAKEVYEEPSQTIDAAMRLQPRCSEKNEGDSGALVVTTRLL
VPGSRIGCLIGKGGSIISEMRNLTRANIRIITMENLPKVASEDEEMVQISGDINVASNAL
LEVTKRLRANLFEMEGSRAGVPYHPMSMDTSHGNRGNFRGHGRGRGRGGRHASHSSRYDP
ELQAADNYGGPQNSGSGYGAYGGNSGRSAISNPVSHGKHHGY
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggctggccagagaaatgactatgcaaaccgatctcattatcaacctgatttccctgaa
agtgaaggaggtaagagaacaaatccatctgatgaaagggaatcacatggcattggacca
gaagatacggtgtaccgatacctgtgccctggtagaaaagttggaagcattatagggagg
ggcggagaaattgtgaagcaaatgagatcagagacgcaggcaaagattagaataagtaac
agtgtgcctggatgcgaggagcgagttgtcattatctatagttcaagtgaggaaagtaat
aattttgcagatagtgatgatcttgtttcaccggcacttgatgcgctctttaaggtgcat
gatagagttattgctgaagaagcacctcctgttgaagatgaatatgatgaagttcagcaa
gttactgtgagaatgcttgtgccttctgatcagattggatgtgtgattgggaaaggagga
caggtggtccaaaacatacgtagtgaaacaggggctcatatccgtatcctcagtggtgag
catctgccaaattgtgcattgaattccgatgagcttctccaggtaagtggcgacactata
gtagtgaggaatgccctctatcagttagcatcctgtcttcatgataatccatcacgatcc
cagcatctacttttgtcttcttccaatctatatagagccagtggtgggtatatgggccca
aatcatggtgcacctcccatgggcgtggtttctctaatgggtccatacgggagctacaaa
aacgatgggggtcttattgtaaaggaattctcgcttcgttttgtttgtccacctgagaat
attggggctgtgattggtaaaggtggtgcaattatcaaacaaataaggcaagattctggt
gcatacattaaagttgatagttctgctgctgaaggagacgattgcctaataactgtatct
gcaaaggaggtgtatgaagaaccatcacaaacaattgatgctgcaatgagactgcaacca
cgatgtagtgagaaaaatgagggagattctggagctcttgttgtcaccactcgtttgcta
gtcccgggctcacgaataggttgtttaatcggtaaaggtggctcgattatttctgagatg
agaaacttaacaagggcaaacattcgtattataacgatggaaaatcttcccaaagttgca
tctgaagatgaagaaatggtccagatcagtggagacattaatgttgctagcaatgctctc
ttagaagtaaccaaacgcttaagagccaatctgtttgaaatggaaggatctagagcgggt
gtcccttaccatcccatgtcgatggacacgtcacatggaaatcgtggtaattttcgtgga
catgggcgtggacgtggacgtggaggtcgacatgcttctcactctagcagatatgatcca
gagttacaggcagctgacaattatggtggtccccagaactccgggagtggttatggagca
tatggtggtaactccggacgttctgctatttcgaatccagtctctcatgggaaacatcat
ggctactag
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