Erigeron canadensis (horseweed): 122595567
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Entry
122595567 CDS
T07610
Name
(RefSeq) elongation factor 1-gamma-like isoform X1
KO
K03233
elongation factor 1-gamma
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecad03019
]
122595567
03012 Translation factors [BR:
ecad03012
]
122595567
Messenger RNA biogenesis [BR:
ecad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
122595567
Translation factors [BR:
ecad03012
]
Eukaryotic type
Elongation factors
122595567
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF1G
GST_N
GST_C
GST_N_2
GST_N_3
GST_C_2
GST_C_3
GST_N_5
HABP4_PAI-RBP1
Motif
Other DBs
NCBI-GeneID:
122595567
NCBI-ProteinID:
XP_043623884
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Position
4:32677088..32692533
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AA seq
413 aa
AA seq
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MALIMHAGRVNKNVYKALIAAEYVGVDIKMADNFEMGVSNKAPEFLKMNPIGKIPVLETP
DGAVFESNAIARYVAHGSSLFGSSKIEYGQIEQWIDFSSFELDANLMGWLRPRVGYGNYI
KPVEENYISGVKRGLDALNTHLASRTFLVGDAVTLADIIMTCNLLLGFKLLMTKSFTSEF
PHVERYFWTMINQPNFSKITGELNQAEAVPPLPSAKKPEAKPKEEPKKEAKKEEAPKPKP
EAAEEEEAPKPKAKNPLDLLPPSKMVLDDWKRLYSNTKSNFREVAIKGFWDMFDPEGYSL
WFCNYKYNDENTVSFVTMNKVGGFLQRMDLARKYAFGKMLIIGNEPPYKVKGLWLFRGPE
IPKFVMDECYDMELFEWTKVDLSDEAQKERVNQMIEDQEPFEGEALLDAKCFK
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggcactcatcatgcatgctggacgggtaaacaagaatgtttacaaggctctaattgct
gcagaatatgttggcgttgatattaaaatggctgataattttgagatgggcgtgtcaaat
aaggctcctgagtttctaaagatgaaccctattggaaagattcctgtccttgagactcct
gatggggcggtatttgagagtaatgcgattgctcgttatgttgcccatggaagctctctc
tttgggtcttcaaaaatagaatatggtcaaatcgagcagtggatagacttttcttcgttt
gagcttgatgcaaatttaatgggatggttacggccaagagtgggatatggcaactacatc
aaacctgttgaggagaactatatttctggcgtgaagagaggtcttgatgctttgaacacg
catcttgcgtcgcgtacttttttggttggtgatgctgtgaccttggctgacatcatcatg
acatgcaacttgttgttgggttttaaattgctgatgacaaagagcttcacatctgagttt
ccacatgttgagaggtatttctggaccatgattaatcaaccaaatttcagcaagataact
ggtgaattgaatcaagcagaagcagttcctcctcttccttcagcaaagaaaccagaggcc
aaaccaaaagaggagcctaagaaagaagccaagaaagaagaggcccctaagccgaagccc
gaagctgcagaggaagaagaggcaccaaagcctaaggcaaagaatcctcttgatctacta
cctccaagcaagatggttttggatgactggaagaggctgtactccaacactaagagtaac
ttccgcgaggttgcaatcaaaggtttttgggacatgtttgatcctgagggttactctctt
tggttttgcaattataagtacaatgatgagaacactgtctcatttgtgaccatgaacaag
gttggtggattcctccagcgtatggaccttgcacggaagtacgcctttggaaagatgttg
atcattggaaacgagcccccatacaaggtgaagggattgtggctgttccgcggaccagag
atcccaaagtttgtaatggatgagtgctatgacatggagctctttgagtggaccaaggtt
gatctttcagatgaggcacaaaaggagcgagtgaatcaaatgattgaggatcaagagcct
tttgagggtgaagctcttctggatgcaaaatgcttcaagtga
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