Erigeron canadensis (horseweed): 122595582
Help
Entry
122595582 CDS
T07610
Name
(RefSeq) E3 ubiquitin-protein ligase XBAT32
KO
K19044
E3 ubiquitin-protein ligase XBAT32/33 [EC:
2.3.2.27
]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122595582
Enzymes [BR:
ecad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122595582
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122595582
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
RING_XB3-XBAT31
zf-C3HC4_3
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
122595582
NCBI-ProteinID:
XP_043623902
LinkDB
All DBs
Position
4:complement(40402493..40406566)
Genome browser
AA seq
495 aa
AA seq
DB search
MRFFSLVGNSFGCSASGERLVSAARDGDVQEAKALLEYNPRLAKYSTFGVRNSPLHYSAA
QGHHEIVSLLIESGVDINLRNYRGQTALMQACQYGHWEVVLTLVLYKANIHKADYLNGGT
ALHLAALNGHSRCIRILLADYVPSVASFYKLANNRSRIEEIVLELDEGSLHETINRPADG
GVTALHMAALNGHVDSLQLLIDLGASVNEVTVEDGTTIDMIGAGSTPLHYAACGGNGQCC
QILIAKGASLAAENAKGWTPLDVARSWHRDWLEEVLIAQPQEEAPTPSPYLCLPLMSVVK
IARECGWSDDSLSGCADPCAVCLENKCAIAAEGCFHEFCTRCALYLCSTSSASNGSQGPP
GSIPCPLCRQGIVSFKKLPGTRPLIGMPRTSLPLSFFTCTTLIEDTDSIALDTTPLCKPE
FPYPLRSLSCQNFPSMKLSSSLCMGASDTTPSLTRTSVDGGRYSRSSFRRSSSHSDSRRS
WLCSLNQSAETAGGY
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgaggttttttagccttgtggggaattcatttggatgctcagcatctggagaaagactt
gtttcagctgcaagagatggtgatgttcaagaagctaaagctttacttgaatataatcct
agacttgctaaatattccactttcggtgttcggaattccccccttcattattctgcagct
caaggtcatcatgagattgtttccctcttgattgaatctggagttgatattaatcttagg
aactatcgcgggcagactgctttgatgcaagcttgtcaatatggtcattgggaggttgtt
ctgactttggttctttacaaggctaatatccataaagctgattatcttaacggaggtact
gcgttacatttggctgctctaaatggacattcacgttgcatccggatcctccttgctgat
tatgtccccagtgttgctagtttttataagcttgcgaataatagatcaagaattgaagaa
attgtattggagttggatgaagggtcacttcatgaaacgataaatagacctgctgatgga
ggtgtaactgctcttcatatggctgcattaaatgggcatgtagatagtttacagttactt
attgatttgggtgcttctgtaaatgaagtcactgtggaagacggcactacgattgacatg
attggtgcgggaagcacaccccttcactatgctgcttgtggtggaaatggccaatgttgt
caaattctgatagctaagggggctagcctagctgccgaaaatgcaaaaggatggacccct
ttagatgttgctcgttcatggcatagagactggcttgaggaagttttgattgcacaacca
caagaagaggcaccgactccttctccttacttgtgccttcctcttatgagtgttgtcaag
attgctagagagtgtggatggagtgatgattccctttctggttgtgctgatccatgtgct
gtttgtttggaaaacaagtgtgccatagctgcagaaggttgttttcatgaattctgcact
cgatgtgcattatatctttgttccacaagtagtgcatcgaatggctcccaaggcccaccg
ggttcgatcccctgccctctctgccgccaggggattgtgtctttcaaaaagcttcccggc
accagaccacttattgggatgccacgaacaagcttaccgctatcgtttttcacgtgtact
actttaattgaagacactgatagcattgcgctagatacaactccgctatgcaagcctgag
tttccttatcctcttagatctttgagttgccaaaattttccatcaatgaaactaagctcg
agtctttgcatgggagcttctgacacgaccccatcgttgacccgtacatcggttgatggt
ggtcggtactctagatcgagttttaggcggtcgagttcacattcagacagtagaagatca
tggttatgttcattaaatcaatcagcagaaactgctggtggatattga
DBGET
integrated database retrieval system
