Erigeron canadensis (horseweed): 122595734
Help
Entry
122595734 CDS
T07610
Name
(RefSeq) serine/arginine-rich splicing factor SR30-like
KO
K12890
serine/arginine-rich splicing factor 1
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122595734
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ecad03041
]
122595734
Spliceosome [BR:
ecad03041
]
Common components
Common spliceosomal components
SR proteins
122595734
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_YTH1
FlhF_2nd
Motif
Other DBs
NCBI-GeneID:
122595734
NCBI-ProteinID:
XP_043624098
LinkDB
All DBs
Position
4:3852815..3857854
Genome browser
AA seq
283 aa
AA seq
DB search
MGRLDRTIYVGNLPGDIREREVEDLFYKYGPIVEIDIKVPPRPPGFAFVEFEDARDADDA
IRGRDGYKFDGQRLRVELAHGGRVSSSVDRHSSYSSGGSRAGVSRRSEYRVYVTGLPSSA
SWQDLKDHMRRAGDVCFSEVFRDRNGMRGVVDYTNYDDMKYAIRKLDDSLFRNQFSKGYI
RVQEYDRRDSYSRSRSRSPCHSRSSSASRSNSYDSRRSRSRSYSPRGNSRRSRSRSISSQ
PRSESSSPPISRSHSRSPTPPPSSHRRNRARSLSRSISRSRSP
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgcttagaccgtactatctatgtcggtaatcttcctggcgatattcgtgaaaga
gaagttgaagatttattctacaagtatggaccaattgttgagattgacataaaagttccg
cctaggcctcctggttttgcatttgtagagtttgaagatgctcgtgatgctgatgatgcc
atacgtggacgggatggctataagtttgatggtcaacggttacgagttgaacttgcacat
ggtggacgggtttcatcttctgtggaccgacacagtagctacagcagtggaggtagtcgt
gctggagtatctaggcgatccgaataccgcgtttatgttactggattaccttcatctgct
tcatggcaagatttgaaggatcacatgcgtcgagctggtgatgtttgtttctctgaagtt
tttcgtgatcgcaatggcatgagaggggttgtggactatacaaactatgatgatatgaaa
tatgcgataaggaagcttgatgactcgcttttccgtaaccaattttccaaaggctacata
cgggtgcaggagtatgatcgaagagacagctactctaggagcagaagtcgaagtccatgt
cattcaagaagcagtagtgcaagtcgcagcaatagctatgatagtagaagaagcaggagc
aggagttattctcctaggggaaattctcgcaggtctcgatctagatcgatttcttctcag
ccgcgttccgagtcgtcttctccccctatttcaagatctcattcaaggtctcctacaccg
ccaccatcttctcatcgccgcaatcgagctaggagcctcagtcggagcatttctcgttct
cgttcaccatag
DBGET
integrated database retrieval system
