Erigeron canadensis (horseweed): 122595746
Help
Entry
122595746 CDS
T07610
Name
(RefSeq) pyridoxal 5'-phosphate synthase-like subunit PDX1.2
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00750
Vitamin B6 metabolism
ecad01100
Metabolic pathways
ecad01240
Biosynthesis of cofactors
Module
ecad_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
122595746
Enzymes [BR:
ecad01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
122595746
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
NMO
Dus
ThiI
FMN_dh
Motif
Other DBs
NCBI-GeneID:
122595746
NCBI-ProteinID:
XP_043624110
LinkDB
All DBs
Position
4:43616971..43618375
Genome browser
AA seq
319 aa
AA seq
DB search
MADESAVVTIYNNNAISDPNNTKKTTFSVKVGLAQTLRGGAIVQVTNVDQAKVAESAGAC
CIMVSDQLNSSGSRSGGISRMLDPAVIKQIQRSVGVPVMAKTRVGHFVEAQILETVGVDY
IDENETIAVADEDNFINKHNFRVPFVCGCSDLGEGLRRVREGAAMIRIQGDGSGTGDIVD
TVRNVRNVMGEIRMLTNMDEDEVFAFAKQISAPYDILAQTKQMGRLPVVHFASGGIVTPA
DAALMMQLGCDGVFVGSEVFECRDPYKRVRAIVQAVRNYNDARILAKVSSGFNVGGANES
ELNDAMAGINLDGSNGSGY
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgaaagtgcagtcgtcactatttacaacaacaacgccatatctgatccgaac
aacacaaagaagacaactttctctgttaaagttggcctagcacaaacgctccgcggcgga
gcaattgtgcaggtcaccaacgttgaccaagccaaagtagctgagtcagctggtgcttgt
tgcatcatggtatccgaccaactaaattcctccggatcgagatccggtgggatttccaga
atgcttgatccggctgttatcaagcaaatccaacgctctgttggagtccctgtgatggcc
aaaacccgagtggggcattttgttgaggcccagatactggaaacagttggtgttgattat
atcgatgagaacgagacaattgcggttgctgacgaggataatttcattaacaaacataat
tttcgggttccgtttgtttgcgggtgttcagatttaggggaagggttgagacgggtgagg
gaaggggcggcgatgattcggatacaaggggatggatctggaactggtgacattgtggat
acagtgagaaatgtgaggaatgtgatgggggaaattagaatgttgacaaatatggatgaa
gacgaggttttcgcctttgctaaacagatatccgcgccttacgatatcttggcgcagacg
aaacaaatggggcggcttccagtggtgcattttgcttctggagggatcgtgacacctgca
gatgcagcattgatgatgcagctaggttgtgatggggtgtttgtgggatctgaggtgttt
gagtgtcgtgatccgtataaacgtgtgagggcgattgtgcaggcggttagaaactataat
gatgcgcgtattttggctaaggtgagttccgggtttaatgttggaggtgcaaatgagtcg
gagttgaatgatgctatggctgggattaatcttgatgggagtaacggaagtggttactga
DBGET
integrated database retrieval system
