Erigeron canadensis (horseweed): 122595772
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Entry
122595772 CDS
T07610
Name
(RefSeq) vesicle transport v-SNARE 12-like
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
122595772
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122595772
Membrane trafficking [BR:
ecad04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
122595772
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Sec20
Androglobin_V
YqjK
DUF5798
Motif
Other DBs
NCBI-GeneID:
122595772
NCBI-ProteinID:
XP_043624144
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Position
4:31587179..31591074
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AA seq
223 aa
AA seq
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MSEALFEGYERQYCELSTNLSRKCNSASSIIDPEQKSKEISELQSGLDEADVLIRKMDLE
ARSLQPSVKAMLLAKLREYKSDLTKLKKEVKKLASAKGGQTAHEELLESGMVDAHMASAG
QRERMEMSTERLNQSSDRIRESRRAVFETEEIGVSILQDLHQQRETLLNSHAKLHGVDDA
IDKSKKVLTSMSRRMSKNKWILGSVIGAFLLAIIFILYYKIFH
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagcactatttgaaggatacgaaagacagtattgtgagctgtctacgaattta
tccagaaaatgtaattcagcttcttctattattgatccagagcaaaaaagcaaagagatt
tcagaactacaatctggattagatgaggctgatgttctgataagaaaaatggatcttgag
gcaagaagtttgcagccaagtgtgaaggcaatgctgcttgcgaagcttcgagaatacaaa
tcggatttgaccaagttgaaaaaggaagttaaaaaacttgcttcagctaaaggcggtcaa
actgcacatgaagagttgctcgagtccggaatggtcgatgctcatatggcttctgcaggt
caacgagaaagaatggaaatgtcaactgagaggctaaatcaatctagtgatagaattaga
gaaagcaggagagctgtgtttgaaacagaggagattggggtctcaatacttcaagatttg
catcaacaacgagaaactctcctaaactcgcacgcaaagcttcatggtgtggatgatgcg
attgacaaaagtaagaaagtgttgacatctatgtcaagaaggatgtcaaaaaacaagtgg
atccttggttcagtgattggagcctttttgcttgcaatcatctttatcttgtattataag
atttttcattag
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