Erigeron canadensis (horseweed): 122596003
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Entry
122596003 CDS
T07610
Name
(RefSeq) uncharacterized protein LOC122596003 isoform X1
KO
K00599
tRNA N(3)-methylcytidine methyltransferase METTL6 [EC:2.1.1.-]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecad03016
]
122596003
Transfer RNA biogenesis [BR:
ecad03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
122596003
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_16
Methyltransf_12
Methyltransf_23
Methyltransf_25
Methyltransf_31
Methyltransf_11
MTS
DUF938
TehB
NodS
Methyltransf_4
PrmA
Methyltransf_2
CMAS
PCMT
Cons_hypoth95
Motif
Other DBs
NCBI-GeneID:
122596003
NCBI-ProteinID:
XP_043624433
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All DBs
Position
4:41697045..41701571
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AA seq
541 aa
AA seq
DB search
MASDESTNSSVEQKPRIQIYSTPNNEVTPFWKEKYEKDAKKYWDVFYKRHQDRFFKDRHY
LDKEWGHFFSDAEEKVVLEVGCGAGNTVFPLAATYPGVYIHACDFSSRAIDLVKAHKDFK
EAKINAFACDITSDDLVNHIPPSSVDIVTMIFVLSAVSPEKMPLALQNIKKIMKPNAYLL
FRDYATGDLAQERLICKDQKISENFFVRGDGTRAFYFSEEFLKSLFQENGFTSEECGVHC
KQVENRSRDIIMNRRWVQAAFCLDGGDVQAHKVPNEPEIGSDVDISEGFAFEMFGISSPK
DEIMELKLRDWNFKIKLLSKEFQHTCKSTGLMLWESARLMASVLASNQTIVSGKKVLELG
SGCGGVCSMIATKTAHMVVPTDGDDKARELLEENIASNLEESLQSKLHIKKLTWGNKEHI
QSVKKLCGDKGFDIIIGTDVTYVSEAIRPLFQTAKELISMERGDEEGLRPALVLCHIFRR
VDESSILSAASCFGFELIDRWPDNTNAESPSQSIINSWFDGRIKEDDYENTALNIMYFHV
K
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgatgaatcaactaatagtagtgttgagcagaaaccaagaatacaaatatat
tctacaccaaataatgaggtcactcctttttggaaagagaaatatgaaaaggatgctaag
aaatattgggatgtgttctataagcgtcatcaggacaggttcttcaaggatcggcattac
ttggataaagaatggggacactttttctctgatgcagaggaaaaggttgttttagaggtt
ggatgtggagctgggaacactgtcttccctttagctgctacctaccctggtgtatatatc
catgcttgtgacttctcatctcgtgcgattgacttggtcaaggcacataaagactttaaa
gaggcaaaaataaatgcctttgcatgtgatataacaagtgatgacctggtcaatcatata
ccaccatcttctgtcgacatcgtaacaatgatatttgtattatctgcagtgtcacctgag
aagatgcctttggcattgcaaaacattaaaaagattatgaaaccaaatgcttatttgtta
tttcgtgactatgctacgggagatcttgctcaggaaaggcttatttgtaaggatcagaag
atcagtgagaacttttttgtcagaggggatggaactcgtgcattctatttctctgaggaa
tttttgaaaagtttgtttcaagaaaatggcttcacctccgaagagtgtggtgtgcattgc
aagcaagtggaaaatcgttctcgtgacataataatgaatcggcgttgggtccaagctgcc
ttttgtttagacggtggtgatgtgcaggcccataaagttccaaacgagcccgaaattgga
tctgatgttgacatatctgaaggatttgcttttgaaatgtttggcatttcgtcaccaaag
gatgagattatggagttaaagttacgagactggaactttaagatcaaactactttccaaa
gagtttcaacacacctgcaaatctactggtttaatgttatgggaatcagctcgactaatg
gcctctgttcttgcttcaaaccaaaccatagtttcagggaaaaaagtattggagctagga
tccggttgtgggggagtctgttcaatgattgccaccaaaacggcccacatggtggtcccc
acagacggagatgataaagcacgagagcttcttgaagaaaatatcgcttcgaatcttgaa
gaatctttacaatcaaagctacatatcaagaaacttacttggggtaataaagaacatata
caatcggtcaaaaaactatgtggtgataagggttttgatatcatcatagggactgatgtt
acttatgtatctgaagcgatcaggccattatttcaaactgcaaaagagttgatttcgatg
gagagaggtgatgaagaggggttgagaccagcacttgtactatgccatatttttcgtaga
gttgatgaatcatctatactttcagctgcatcttgttttggttttgaactcattgataga
tggccagataacacgaatgcggaaagcccctcccagagtatcatcaatagttggtttgat
ggtagaattaaggaagatgattatgagaatactgccttaaacatcatgtactttcatgtc
aagtga
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