Erigeron canadensis (horseweed): 122596009
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Entry
122596009 CDS
T07610
Name
(RefSeq) E3 ubiquitin-protein ligase RGLG4 isoform X1
KO
K16280
E3 ubiquitin-protein ligase RGLG [EC:
2.3.2.27
]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122596009
Enzymes [BR:
ecad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122596009
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122596009
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Copine
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
vWA-TerF-like
zf-C3HC4
zf-C3HC4_4
zf-RING_5
Prok-RING_4
zf-RING_2
Sina_RING
IBR_2
Motif
Other DBs
NCBI-GeneID:
122596009
NCBI-ProteinID:
XP_043624440
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All DBs
Position
4:complement(22657470..22663033)
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AA seq
402 aa
AA seq
DB search
MGNLLSQICGFVAAKHPPATASINRSLSQQASMFSRKGSSVKSSKSKKAFKNKYGYIPDN
YSSLEQVTQALRNSGLESSNLILGIDFTKSNEWTGKESFNNQSLHAIGDQPNPYEKAISI
IGATLAPFDDDNLIPCFGFGDVTTHDQEVFNFHDDGSPCHGFEEVLNCYKRVVAGVQLAG
PTSFAPVVEAAINIVEKSGGQFHILVIIADGQVTRGMDTSDGELSSQEQKTITSIVEASL
YPLVIILVGVGDGPWADMKRFDDKLPAREFDNFQFVNFTGIMSTELSPTRKEAAFALAAL
MEIPTQYEAVHELGLLGQTTGNAKRINPRPPPRPRGRAHVPHVNSTSATQDDDYKICPIC
LTNEKDMAFGCGHVACRECGSRLSRCHICRQVISNRIRLYTG
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgggcaatcttttatctcagatttgtggttttgttgcagcaaaacacccacctgccaca
gcatcaataaaccggtcgttgtctcaacaagcatcaatgtttagtcgaaaaggttcaagc
gtaaagtcttcaaaatccaaaaaagccttcaagaacaagtatggatacatcccagacaac
tattcttctctagaacaggttacacaggcacttagaaattctggattggagtcttctaac
cttattcttggaatagattttaccaagagtaacgaatggacaggtaaagagtcgttcaat
aatcaaagccttcatgccattggtgatcaaccaaacccatacgagaaggccatatccatt
ataggagcgactcttgctccttttgatgatgataacttgattccttgttttggatttgga
gatgttacgacacatgaccaagaagtatttaactttcacgacgatggttctccttgccac
ggatttgaagaagtcttaaattgctataagagggttgtcgcaggcgtacaattggctggg
ccaacctcttttgcacctgttgttgaggctgctattaatatagtagagaaaagcggaggt
caattccatattcttgttatcatagcagatggccaggttacaaggggcatggatactagc
gatggagagcttagttcacaggaacagaaaacaattacctcaattgttgaagcaagtttg
tatcctctcgtaattatccttgttggcgttggagatggtccctgggctgacatgaaaagg
ttcgatgacaaacttcctgctcgtgaatttgataactttcagtttgttaactttactggt
atcatgtccacggagctaagcccaactcgcaaagaagcagcttttgcacttgctgccctt
atggagatcccaacacaatatgaggctgttcatgaacttggcttacttggacaaacgacc
ggaaatgcaaagagaataaatccacggccacctcctcgtccaagaggtcgagctcatgtt
cctcatgtaaacagcacatcagctacacaagatgatgattacaagatctgcccaatctgt
ctaacaaatgaaaaggatatggccttcggatgtggacatgtggcttgtagagaatgcgga
tcaagattgagtcgttgtcatatatgtcgccaagtaataagcaatcgaatcaggctttat
acagggtga
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