Erigeron canadensis (horseweed): 122596194
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Entry
122596194 CDS
T07610
Name
(RefSeq) heparanase-like protein 3
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00531
Glycosaminoglycan degradation
ecad01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
122596194
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ecad00536
]
122596194
Enzymes [BR:
ecad01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
122596194
Glycosaminoglycan binding proteins [BR:
ecad00536
]
Heparan sulfate / Heparin
Enzymes
122596194
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
122596194
NCBI-ProteinID:
XP_043624662
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All DBs
Position
4:complement(39429548..39433225)
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AA seq
544 aa
AA seq
DB search
MGFLNLQMGICFFVLLLTLSCTLVDSQIESRKTVIQGRIFIDGKSAIAKIDSDFICATMD
WWPPEKCDYGTCSWGHASLLNVDLNNKIFQNAIKAFSRLKIRLGGTLQDKVVYQTENNPK
PCIPFLKNTSELFGFTEGCLPLYRWDQLSNFFQETGAEIIFGLNALAGKTIQADNSAVGP
WDSANAESLMRYTVKKNYTMYAWELGNELSGTGVGTRVTANQYAFDTLTLRNIVQEIYKG
VEPKPRIIAPGGFFDANWFKEFVDKTPETLDIITHHIYNLGPGVDQHLVEKILDPSYLDG
EADTFKQLQNILKTSITSASSWVGEAGGAYNSGHNLVTNAFVFSFWYLDQLGMSAVYDTK
TYCRQTLIGGNYGLLNTTTFEPNPDYYSALLWHRLMGRKVLSTNFNGTKKIRAYAHCAKE
SNGITLLLINLDNKTTVDVSLSLNSTWRVHKLKSSHHHHHKANKSRNSKIGGLNTREEYH
LTAKNRDLHSQVMMLNGKELAVNSYGEIPPLEPVYLNSSEAISVAPFSIVFAHIPHLTVY
ACNN
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgggctttttgaatttgcaaatgggtatttgtttttttgttcttttacttactttgagc
tgcactcttgtggattcacaaattgaaagtagaaaaactgtaattcaaggaaggattttt
attgatggaaaaagtgccattgcaaagattgatagtgactttatttgtgctactatggat
tggtggccaccagagaagtgtgattatggtacttgtagttggggccatgcttcccttctc
aatgtggatctaaacaacaaaatttttcagaatgccatcaaagctttttcaagattaaag
attagattaggagggactttgcaagacaaagttgtttaccaaacagaaaataatccgaaa
ccctgcatcccattcttgaaaaacacctcagagttatttggtttcactgagggatgcttg
cctctatacagatgggatcaattaagcaatttcttccaagaaacaggggctgaaattata
tttggattaaacgcacttgctggcaaaacaatacaagctgataattcagcagttggacct
tgggactctgcaaatgctgaatctttgatgcgttacacggttaagaagaattacaccatg
tatgcttgggagcttgggaatgagctgtctggaactggagttggaacaagagtaacagca
aatcagtatgctttcgacacattgaccttgcgaaacatagttcaagaaatctataaaggt
gtcgagcctaagccacggataattgcacctggtggtttctttgatgccaactggttcaag
gagtttgtagacaaaacacccgaaaccctagacataatcactcaccacatatacaatctt
ggcccaggagttgatcaacatcttgttgaaaagatactcgacccatcatatctagatggg
gaggctgatactttcaagcaacttcagaatatcctcaagacttctataacttcagcttct
tcttgggttggtgaagctggcggggcttataacagtggacacaatctcgtcactaatgca
tttgtgttcagtttctggtacttggatcagctaggaatgtcagctgtttatgacacaaaa
acatactgcagacaaactttgattggaggaaactatggtttactcaacactacaaccttt
gagccaaatccagattactacagtgctcttctttggcatcggttgatgggtagaaaggtt
ctttctacaaacttcaatgggacgaagaaaattcgagcttatgcacattgtgccaaagaa
tctaatggaataacattactactgatcaaccttgataacaaaacgacagttgatgtaagc
ttatctttaaatagcacttggagggtgcataaactcaaatcttctcaccatcatcaccat
aaagcaaacaagtcacgtaactctaagattggtggattaaacacacgggaagaataccat
ttgacagccaaaaacagagatttacacagtcaagtaatgatgcttaatggtaaagagttg
gcagtaaattcatacggggagataccaccattagagcctgtgtatctgaattcttcagag
gccattagtgttgctcccttttctattgtgtttgctcatataccacatcttactgtgtac
gcttgcaacaattga
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