Erigeron canadensis (horseweed): 122596221
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Entry
122596221 CDS
T07610
Name
(RefSeq) uncharacterized protein LOC122596221
KO
K15198
transcription factor TFIIIB component B''
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecad03021
]
122596221
Transcription machinery [BR:
ecad03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
122596221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-bind_7
Myb_DNA-binding
Myb_DNA-bind_6
SANT_DAMP1_like
DUF7616
Motif
Other DBs
NCBI-GeneID:
122596221
NCBI-ProteinID:
XP_043624699
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All DBs
Position
4:complement(34929866..34937507)
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AA seq
657 aa
AA seq
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MDFDLDDLLSSDAANNAKAGAKFQPKAKPKPKPKPKPKTQPDANSGPTPSKQFAEAVSNA
ADVFLSRTEEELPGNDVNQISANIHDNPQSSSKKSQEEDCTQNAESSVTAESLNNLLPVS
ATETVTSPPSVETPTEHVHIDGNLERGPPDPNLINNIDTCTNLDSFTQLDPLTEGEAIIY
NDNVDFQIRNFPSGSKDTENWESFDILSPSKTCSGPKVCKFKPKPKAQTRRVQQTADLPV
LDSVPVQYEENNHSVPSQNNFMENEVFPSFTQDESPGLSSIRVTDSVPTETISDIHVNED
PIDLVENSQVDSEHQSGVSSERLKVPNKRLQLIDESDDEGINDVHRNEDNNNVGNHGPEN
EIKSGRKGRKSKKPVSNKEKPVRKRKKVSEVPGESTKAPKKKFSHSTRRNKRQVDPKYLI
MPEEELELQMHDVPMKELIRLAEHRERIAKKEASTSATHVSNQSSSFSNQKNEGEAIAQG
KHDDDEPEAENATFYNYRTYTKITPRMKWSKQDTELFFEAVQQFGTDLSMIKEFFPGRTR
EQIKSKYKKEERQHPSRLNDAITTRAKGHSHFEVVIERLKQAQAENSENDDPIDLMGEDE
EGLPTHDNNEEAADATKPVQSEKEFSQDTPAAAAGSPTKSQDSEDDMFRWDQYKSDI
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggattttgatttagatgatttactctcaagtgatgctgcaaataatgcaaaagctggt
gcaaagtttcaacccaaagctaagccaaaacccaaacccaaaccaaaacctaaaacccaa
ccagatgcaaattctggaccaactccttcaaaacagtttgccgaggctgtttctaatgca
gctgatgtgtttctaagcaggaccgaagaggaactgcctggaaatgatgtcaaccaaatt
tctgcaaatatccatgataatccgcagtcttcttctaaaaagtcacaggaagaggattgc
acacagaatgctgaatcatctgttacagcggaatcactcaataacttacttcctgtatct
gcaacggaaacagtgacttcgccgccatccgtagagacaccaactgaacatgtgcacata
gatgggaatctagaaaggggacctccggatcctaatttgatcaataatatcgatacttgc
acaaacttagatagttttactcagctagatcctttaacagaaggagaagctataatttat
aatgacaatgtagacttccagataagaaattttccatcaggatcaaaggatacagaaaat
tgggaatcttttgacattttgtctccgtcaaaaacatgctcagggccaaaggtttgcaaa
ttcaaaccaaagccgaaagcacaaactcgtagagtgcaacagactgctgaccttcctgtt
ctggattcagtacctgttcaatatgaggaaaataatcattcagttccttctcaaaataac
tttatggagaatgaggtttttccttcatttacacaagatgaaagtcctggtttgtcatct
atcagagtcactgattcagttccaacagagacaatttctgatatccatgtgaatgaagat
ccaatagatctggtagaaaattcacaagtggattctgagcatcagtcaggtgtatcttca
gaaagattaaaggtcccaaataaaagactacaacttatagacgagtctgatgatgaaggt
atcaatgatgtacatagaaatgaagacaataataatgttggtaatcatggaccggaaaat
gaaattaaaagtgggagaaaggggagaaagtcaaagaaacctgttagtaacaaggaaaaa
cctgttagaaagcgtaaaaaggtctctgaggtaccaggtgaatcgaccaaagcacccaaa
aagaaattctctcatagcacccgacgaaataaaagacaagttgacccaaaatatcttata
atgcccgaggaggagctagagttgcaaatgcatgatgtgcctatgaaggagttaatcagg
cttgcggaacatagggagcggatcgcgaaaaaggaagcatccacatcagcaacacatgta
tcaaatcaaagttcaagtttttccaaccagaagaatgaaggtgaggcaattgcacagggt
aaacatgatgacgatgaaccagaggcggaaaatgccaccttttataattatcgaacctac
acaaaaataacaccaagaatgaaatggtcaaaacaagatacagaactcttctttgaggct
gttcagcaatttgggacagatctgtcaatgataaaagaattcttccctgggcggactcgt
gaacagataaaatcgaagtacaaaaaagaagagcgacagcatccttcgaggcttaatgat
gctataaccactcgcgctaaaggtcattctcattttgaagttgtaatcgagaggctaaaa
caagcccaggcagaaaattctgagaatgatgacccaatcgatctaatgggagaggatgag
gagggattgcctacacatgacaacaatgaggaagctgcggatgcaacaaaacctgttcaa
tcagaaaaagaatttagccaagatactcctgcagctgctgcagggagtccaaccaagtct
caagatagtgaagatgacatgtttagatgggatcaatataaaagtgatatataa
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