Erigeron canadensis (horseweed): 122596228
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Entry
122596228 CDS
T07610
Name
(RefSeq) E3 ubiquitin-protein ligase SPL2
KO
K15688
E3 ubiquitin-protein ligase MUL1 [EC:
2.3.2.27
]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122596228
Enzymes [BR:
ecad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122596228
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122596228
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDE
zf-C3HC4_3
Prok-RING_4
zf-RING_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
122596228
NCBI-ProteinID:
XP_043624706
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Position
4:complement(42818773..42824116)
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AA seq
375 aa
AA seq
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MSSVYEQPAIALVAHIATALDGAVVGVALACIAVNSILNLRTTSSALKKIKASPSVTVSD
LRSLLSSDDDTNSADNKLVIVRGVVEPTSAATLLSHVTNEAAVIVQRTQLCIYNQWRGFF
GWNTDFMSLVARHWKEQEASSLRTVPFILVDGVKQPKCDYLTVNLDGSTHSLPLTTVYHN
LQPVHASAYTFFQAFFGHEYPVGVVDEEKILPVGKEITAVGLVRLKDGNPEVMASKDLPF
FLSHMSKDEMVAELDFKTRVLWWSSIVIGTFATGILGYAILRNWNRWQLWKQQKRIQQQT
AIEAEAMETEAEGSGSLPEEQLCVICLLRQRRSAFLPCGHLVCCPKCAMSVEREMSPKCP
VCRQMVSASVRIFDS
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcagtatacgaacaaccagccatcgcactagtggcacacatagccacagcgtta
gacggtgcagtagtaggcgttgcgctagcttgtattgcagtcaattccattctcaatctc
agaacgacgtcgtccgctttgaaaaaaatcaaagcttcgccgtccgtcaccgtctccgat
ctccgctctcttctctcttccgatgatgacactaattccgctgataataaactcgtaatc
gttcgcggtgttgttgaaccgacatctgctgctactttgctttctcatgtgaccaatgag
gccgctgttattgttcagagaacacaattgtgtatatacaaccaatggaggggatttttc
ggatggaacacagattttatgtcgttggttgcaagacactggaaagagcaagaagcttca
tcgttaagaacggttccttttatccttgttgatggggttaaacagccaaaatgtgattat
ctgaccgtaaacctggatggctcaacacattctctacctcttacaactgtataccataat
ttgcagcctgttcatgcttctgcttacactttctttcaggcattttttggtcatgagtac
cctgttggagttgtggatgaggagaaaattctacctgttggaaaggaaatcactgcagta
ggccttgtcaggttgaaagacggaaatcctgaagtgatggcaagcaaggatttaccgttt
ttcctatcacatatgagcaaagatgagatggtagcggaacttgacttcaagacaagagtt
ttatggtggagtagtattgtgattggtacatttgcaactggcatcctaggttatgctatt
ctaaggaattggaacagatggcaattgtggaaacaacaaaaacgaattcagcaacaaact
gctatcgaggcggaggctatggagacggaagctgaagggagcggtagtcttccagaagag
cagttgtgtgtgatatgtttactgaggcaacgacgatctgcatttttaccttgtgggcat
ctagtctgttgtccaaaatgcgctatgtcagtagagcgagagatgtctcccaaatgccct
gtttgtagacagatggtcagcgcttcagtcagaatctttgactcttga
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