Erigeron canadensis (horseweed): 122596290
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Entry
122596290 CDS
T07610
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 11
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03020
RNA polymerase
ecad03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
122596290
09124 Replication and repair
03420 Nucleotide excision repair
122596290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecad03021
]
122596290
03400 DNA repair and recombination proteins [BR:
ecad03400
]
122596290
Transcription machinery [BR:
ecad03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
122596290
DNA repair and recombination proteins [BR:
ecad03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
122596290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
Tup_N
VirK
Motif
Other DBs
NCBI-GeneID:
122596290
NCBI-ProteinID:
XP_043624774
LinkDB
All DBs
Position
4:26705894..26710286
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AA seq
115 aa
AA seq
DB search
MNAPDRYERFVVPEGIKKVSYERDTKIINAASFTIEREDHTIGNIVRMQLHRDGNVLFAG
YKLPHPLQYKIIVRVHTTSQSSPMQAYNQAINDLDKELDHLKSAFEAEVARFSGE
NT seq
348 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctccagatcgttatgagagatttgttgttcctgagggaataaagaaagtatcc
tatgaaagggatacgaagatcataaatgcagcctcgtttactattgagagagaagaccac
accataggaaacatagtccgcatgcagttacacagggatgggaatgtgctctttgctggc
tacaagcttcctcaccctctccagtacaagattattgttagggttcacacaactagccag
tcgtcgccaatgcaagcttataaccaggctattaatgatcttgacaaggaacttgatcat
ctgaaatctgcatttgaggctgaggtagcaaggttttctggggagtag
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