Erigeron canadensis (horseweed): 122596322
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Entry
122596322 CDS
T07610
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
122596322
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ecad04040
]
122596322
Ion channels [BR:
ecad04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
122596322
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
122596322
NCBI-ProteinID:
XP_043624809
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Position
4:complement(26261760..26266077)
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AA seq
625 aa
AA seq
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MKFFDPDSEFILHWNKTFLLCSVFALSLDPLFFYIPVIDGTQKCLDVDRRLEITVCVLRS
FADILYVIHIIIQFRTAHVPRYNHLLGKREFIDEPYYVARRYLTSYFIIDVLAALPLPQF
AVLVIIPNLHGPASLLTKKLLKFIILSQNIPRVARTALFYHKVTKVTGFLTEKAWAGAGF
NFFLYVLASHVVGALWYLFAIESELRCWNIACQSHNCHTKYLFCEEGRVGDYGFLNTSCP
LLERNEIKDSTKFDFGIYLDALQTRVLETRDFRQKVLYCSWWGLQSLSSVGQGLKASTFY
GEILFADFIAIIGLVLFALLIGNMQRYLQSFSNLTLRVEEMKEKRQEAEELMSHFSLSEE
LRQRVRRHKQYKWKITRGVELESFVRDLPRDLRRDIKRHLCLLSLRRVPLFNHMDEHLLD
AMCERLNPVHYTEHSYLAREGDPVPEMLFITRGEVVSITTDGGRMGFFNSINLKAGDFCG
EELLTWALDPTTKRIPFSTRTVKTITKVEAFALVADDLMFVASQFRRLHSRIIQHTFRFY
SQQWRTWAACYIQAAWRGHCKRKLTMMLEARECRLQDALASSKETSTLSVGASIYVSRFS
SNALRILRRNHMSTPKLELLLPKPA
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgaagttttttgatccagatagtgaatttattctgcattggaacaaaacatttttatta
tgctctgtttttgcactatccttggatcctttgtttttctatatacctgtaattgatggt
acccaaaagtgcctagatgtagaccgtagattggagatcactgtgtgtgtccttcgttca
ttcgcagacatattatatgttattcatatcattatccagttcagaactgcgcatgttcct
cgttataatcatttacttggaaaaagagaatttatagatgaaccttattatgtggcaaga
cgttacctaacatcttacttcatcattgatgttttagcagctcttccccttccacagttt
gcagttttggtaatcatcccaaacttacatgggccagcctcgttactgacaaaaaaactt
ttaaagttcattatcttgtctcaaaacatccctcgagttgctcggaccgccttgttctat
cataaggtaaccaaagttactggtttcctgaccgaaaaagcatgggctggagctggtttt
aacttttttctctatgtgctagctagccatgtagttggagccctctggtacttgtttgca
atagaaagcgaacttagatgctggaatatcgcatgtcaaagtcataactgtcacaccaag
tatttattttgtgaggaaggccgtgtgggagattatggattcctgaacacttcttgccct
cttctcgaacgaaatgaaattaaagattcaacaaagtttgattttgggatataccttgat
gctcttcaaactcgagtgttagaaaccagggacttccgccaaaaagttttgtattgttct
tggtggggtttgcagagtctaagttctgttggtcaaggcctaaaagcaagcactttctat
ggggagattctatttgccgactttattgcgattattgggctggttctatttgctttgctt
ataggcaacatgcagagatatttgcagtctttctcaaacttgactcttagagtggaggag
atgaaagaaaaaaggcaagaagccgaggagctcatgtcacatttttccctctctgaggag
ttaaggcagcgagttaggagacacaagcaatacaaatggaaaatcactaggggagttgag
ttagagtcctttgtcagagaccttcctcgggacttgaggagggatataaaacgtcatctg
tgcttattatcactaagaagagtaccgctgtttaaccatatggatgaacatttattggat
gctatgtgtgagcgtttaaatccagttcattacacagagcatagctacttagccagagag
ggtgatccggtgcctgaaatgctcttcatcactcgtggtgaggtagtaagtataacaact
gatggtggaagaatgggctttttcaactctattaacctcaaagccggtgacttttgtggg
gaggagcttctcacatgggcattagatcctacaactaagcgaattcctttctctactaga
actgtgaaaacaattacaaaagttgaagcttttgctctcgtggctgatgatctcatgttt
gtggcatcccaatttagacgtcttcatagcaggattatccagcatacttttaggttctac
tcacagcagtggaggacatgggcagcttgctacatacaggctgcttggcgtggacactgt
aaaagaaagctgactatgatgttggaggcacgagaatgtagactgcaggatgccttggcc
agcagcaaagagacttccaccctcagcgtcggtgcctccatctatgtgtcaagattttcc
tccaatgcattacgtatcttaagacggaatcatatgtcaacacctaagttggagttgctt
cttccgaagccagcttag
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