KEGG   Erigeron canadensis (horseweed): 122596353
Entry
122596353         CDS       T07610                                 
Name
(RefSeq) SKP1-like protein 1B
  KO
K03094  S-phase kinase-associated protein 1
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad03083  Polycomb repressive complex
ecad04120  Ubiquitin mediated proteolysis
ecad04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    122596353
   04120 Ubiquitin mediated proteolysis
    122596353
  09126 Chromosome
   03083 Polycomb repressive complex
    122596353
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ecad04131]
    122596353
   04121 Ubiquitin system [BR:ecad04121]
    122596353
   03036 Chromosome and associated proteins [BR:ecad03036]
    122596353
Membrane trafficking [BR:ecad04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    122596353
Ubiquitin system [BR:ecad04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     122596353
   Cul7 complex
     122596353
Chromosome and associated proteins [BR:ecad03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     122596353
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     122596353
SSDB
Motif
Pfam: Skp1 Skp1_POZ
Other DBs
NCBI-GeneID: 122596353
NCBI-ProteinID: XP_043624853
LinkDB
Position
4:5968115..5971690
AA seq 161 aa
MSTSSKKMIVLKSSDGETFEVEEIVALESQTIKHMIEDDCADTSIPLPNVSSKILSKVIE
YCKKHVESSSSENKDDKASSEDDLKSFDSEFVKVDQGTLFDLILAANYLNIKSLLDLTCQ
TVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENAWAFE
NT seq 486 nt   +upstreamnt  +downstreamnt
atgtcaacatcatcaaagaaaatgatagtattgaaaagttcagatggagaaacatttgag
gtggaagaaattgttgctttggaatcacagacaataaaacatatgattgaggatgattgt
gcagacacaagtattcctctgccaaatgtttcaagcaagattctttccaaagttattgag
tattgcaaaaaacatgttgaatcatcatcatctgaaaataaggatgataaggcttcttca
gaagatgatttgaaatcttttgattctgagtttgttaaagttgaccagggcaccctcttt
gacctcattttggctgctaactatctcaacatcaagagcttgctggacttgacatgccaa
accgtggctgacatgattaaggggaagacacctgaagagatccgcaagactttcaatatc
aagaatgatttcaccccagaggaggaagaagaggttcgcagggagaatgcctgggctttt
gagtaa

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