Erigeron canadensis (horseweed): 122596371
Help
Entry
122596371 CDS
T07610
Name
(RefSeq) high mobility group B protein 13-like
KO
K09273
upstream-binding transcription factor
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecad03000
]
122596371
03021 Transcription machinery [BR:
ecad03021
]
122596371
Transcription factors [BR:
ecad03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
122596371
Transcription machinery [BR:
ecad03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
122596371
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
CHDNT
YABBY
DUF7167
Motif
Other DBs
NCBI-GeneID:
122596371
NCBI-ProteinID:
XP_043624873
LinkDB
All DBs
Position
4:complement(2953391..2956340)
Genome browser
AA seq
491 aa
AA seq
DB search
MADIATAEQIHVPTKKKTRKPLNPLTLSQNESNIVTGSISQPSLILQNSAGKENVDPLSQ
NKSLKTKKSSKSKKPIQPEVTFEKEFQEMQVKLEKMTLEKQQVEEMLKLKEQELESCNEE
QKKVKLELKKLQKMKEFKPTVTLPLLQSVKDKDQVTKKKKGGQDTKKPATPYIMWCKEHW
TEVKNENPDAEFSEIASILGGKWKMVTPEEKKPYEEKYQIEKVVYSKIVDNEKRENEAMK
LLNEEQKQKTAMELLEQYMQFKQEAENEGDNKKNKKEKDPLKPKRPESAYFLFIKERRAA
LIAENKSVVEIAKITGEEWKNMTEEQKSHYEKIAKANNVKYTQEMEVYKQNKEEEAEIAK
KEEDELLKVLKQEALQLLRKKEKTETIIKKTKDKKNKKKEEKKNKRIDDPSKPKRPPSSF
LLFSKETRKDLSKEKPGISNAQLTALISVKWKDLSEEQKQKWNSEAAEAMEIYKKEIAEY
NKNAAEIPNDN
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggccgatattgcaaccgctgaacagatccacgttccgacaaagaagaaaacccgaaag
ccactgaacccactaaccctttcacaaaatgaatccaatatcgtcacaggatcgatctct
cagccatcattgatactgcagaactctgcaggtaaagaaaacgtggatcccctttcacaa
aacaaatctctaaaaaccaagaaatcatcaaaatcaaaaaagccaatacaaccggaagtc
acattcgaaaaagaatttcaagaaatgcaagtgaaacttgaaaagatgacactcgagaaa
caacaggttgaagagatgttgaaattgaaggaacaagaactcgagtcttgtaacgaagaa
caaaaaaaggttaaattggagcttaaaaagttgcagaaaatgaaagaattcaaacccact
gtgacactgccccttttgcaatctgtgaaagacaaagatcaagtgaccaagaagaagaag
ggtggccaagatactaaaaagccagcaactccttacattatgtggtgcaaggagcattgg
actgaggtgaagaacgaaaacccagatgcagagttcagtgaaatagcaagcattttgggt
gggaaatggaagatggtaacgcctgaagagaaaaagccttatgaggagaaatatcagatt
gagaaggtggtgtattcgaaaattgtggacaacgaaaagagagaaaatgaagctatgaag
ctcttgaatgaagaacagaagcagaaaacagctatggagttgcttgagcaatatatgcag
tttaaacaagaagctgagaatgagggagataacaagaagaacaagaaggagaaagatcca
ttgaagccaaaacgtccagagtctgcgtatttcttgtttataaaggagaggcgcgctgct
ttgattgctgaaaataagagtgttgtggagattgctaagataacaggagaagaatggaag
aacatgacagaggagcaaaaatctcactatgaaaaaatagcaaaggcgaataatgtaaaa
tatacacaagaaatggaagtttacaagcagaataaagaagaggaagctgaaatagccaag
aaggaagaagatgagcttttgaaagttttaaagcaggaagctttacagttgcttagaaaa
aaagagaaaaccgaaaccatcattaagaagacaaaagataagaagaacaaaaagaaggaa
gagaagaaaaacaagagaatcgatgatcctagcaagcccaagcgccctccatcttcattt
ctcctgttcagcaaagagacaaggaaggatctgtcgaaagagaagccaggaatcagcaat
gcccaactcactgctctcatttcggtgaagtggaaagatttaagtgaagaacagaaacag
aaatggaacagtgaggctgcagaagctatggaaatttacaagaaggaaattgcagagtat
aacaagaatgctgcagagatccctaatgataactag
DBGET
integrated database retrieval system
