Erigeron canadensis (horseweed): 122596456
Help
Entry
122596456 CDS
T07610
Name
(RefSeq) RHOMBOID-like protein 10, chloroplastic
KO
K27605
rhomboid-like protein, plant [EC:
3.4.21.105
]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ecad01002
]
122596456
Enzymes [BR:
ecad01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
122596456
Peptidases and inhibitors [BR:
ecad01002
]
Serine peptidases
Family S54: Rhomboid family
122596456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
DUF2139
DER1
DUF1751
Motif
Other DBs
NCBI-GeneID:
122596456
NCBI-ProteinID:
XP_043624971
LinkDB
All DBs
Position
4:complement(33080304..33087905)
Genome browser
AA seq
336 aa
AA seq
DB search
MVESFAPQPPPEFSFSGAKPFHLITNAAALRLGHFLRHSFATHRHHLFGSILHSPLKIPH
FGHVLPLNEVSCRNLHQFNWFDFPQWSHDVWTTTLSSCMYLFGEGNNINYGDQEKAYLRA
PTRGPVNKRRLTNMLLAINVLVYIAQVASKGELIMWGAKINSLINKGELWRLVTSSFLHA
NVGHLMINCYSLNSIGPIMEHLSGPRRYLAIYMTSAITSSAMSYWLSKAPSVGASGAIFG
LVGSFAIFVVRHNNLVKGGVGDLKHVARVIALNMAIGMLSQGIDNWGHLGGLVGGIATSW
LIGPAWKFESESYLGRRVLVDKAPIFSLPGTKPASQ
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggttgagtcatttgcaccacagccaccaccggaattctcattttccggcgccaagcct
ttccatctcatcacaaacgccgccgctctccgccttggtcactttctccgtcacagcttc
gccacccatcgccaccacttatttgggtcaatcctgcactcacctttgaagatccctcat
tttggccatgttcttccgctaaatgaagtttcttgtagaaacttacaccaatttaattgg
tttgattttcctcaatggtctcatgatgtctggacaaccacactctcaagctgcatgtat
ttatttggtgaaggaaacaatatcaattatggagaccaagaaaaggcatacttacgggct
ccaacaagaggtcccgttaataaaagaagattgacaaatatgttgcttgccattaatgtg
ttggtatacattgcacaagtagcatcaaaaggggagttgataatgtggggagcaaagatt
aacagtctcatcaacaaaggtgagctgtggaggctagtaacctcttcctttctacatgca
aatgttggacatcttatgattaattgttattctctaaactccattggaccgatcatggag
catctaagtggccccagaagataccttgcaatttatatgacctctgcaatcacaagttca
gccatgagttattggctcagtaaagcaccatcagttggggcatcaggggcgatttttgga
ttagttggatcctttgccatatttgtagtgagacacaacaacctggttaaaggtggtgta
ggagacttgaagcatgttgcacgtgtgatcgccttaaatatggctattgggatgttgtca
caaggtattgacaactggggacatcttggagggttagttggtggaattgctacatcatgg
cttattggtcctgcatggaagtttgaatcagaatcttatcttggaagaagagtacttgtc
gataaagcaccaatattctctcttccaggcacaaaaccagcatctcagtaa
DBGET
integrated database retrieval system
