Erigeron canadensis (horseweed): 122596519
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Entry
122596519 CDS
T07610
Name
(RefSeq) methionine--tRNA ligase, cytoplasmic-like
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00450
Selenocompound metabolism
ecad00970
Aminoacyl-tRNA biosynthesis
ecad01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
122596519
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122596519
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ecad01007
]
122596519
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecad03016
]
122596519
Enzymes [BR:
ecad01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
122596519
Amino acid related enzymes [BR:
ecad01007
]
Aminoacyl-tRNA synthetase
Class I (U)
122596519
Transfer RNA biogenesis [BR:
ecad03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
122596519
Prokaryotic type
Other AARSs
122596519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA-synt_1
Anticodon_3
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
122596519
NCBI-ProteinID:
XP_043625045
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Position
1:complement(60032998..60036124)
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AA seq
512 aa
AA seq
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MADEKYVEKRAAAKVPIAGKRNILVTSALPYVNNVSHLGNIIGCVLSGDVFARYCRLRGY
NTIYISGTDEYGTATETKALEENCTPKEICDKYHAIHRDVYKWFDISFDEFGRTSSPQQT
EVCQEIFKKLLDNNCLSEDTMQQLYCDKCQKFLADRLVIGTCPKAGCNYDAARGDQCENC
GKLLNPTELINPKCKVCEKSPRIRDTSHLFLELPLLEDRLREYISSMSVAGSWSQNAIQA
TNAWLREGLRQRCITRDLKWGVPVPHERFKDKVFYVWFDAPIGYVSITSCYTPEWRLWWQ
NPENVELYQFMGKDNVPFHTVMFPSTLLGTNENWTLMKTISVTEYLNYEIGVFYAFLSTE
SKFWKLYKEDLPSCSIVMKTSVGVVYLLACLLEPFMPSFSIKVLKQLSLPLQLSLSDEKG
DVGKAKRPWELVPAGHKIGIPAGHKIGKDERLFQELNDEDVEKFRTKYDGSQAERVAKAK
SPTTELNNSKSLIILALCLSLMLLCVYIQGSC
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaaaaatacgttgagaaaagagcagcagcaaaagttcccattgccgggaaa
cggaacatactagtaacaagtgctctgccgtacgtcaacaatgtttctcacttgggaaat
atcatcggctgtgtgttgagtggcgatgtgtttgctaggtattgtcgattgaggggatac
aacactatatacattagtggaactgatgagtatggaacagctaccgaaactaaagcattg
gaagaaaattgcacccccaaagaaatttgcgataaatatcacgcaattcacagagatgta
tataaatggtttgatataagttttgatgaatttggacgaacttcatcgccacaacagacc
gaggtttgccaagaaatttttaaaaagttattggataacaattgtctttctgaggacact
atgcagcagctttactgtgataagtgccagaaatttttagctgaccgccttgttataggt
acctgcccaaaagcaggttgtaattatgatgcggcacgaggtgatcaatgtgaaaattgt
ggcaaactattaaatccaacggaacttattaatcctaaatgcaaggtttgtgaaaagagt
cctcgtatccgtgacacaagtcacttgtttcttgagcttccactgttggaggatagactg
cgggagtacattagcagcatgtcggtggctggatcatggagccagaatgctattcaagcg
acaaatgcatggctcagagaaggcttaaggcagcggtgtattactagagatctcaagtgg
ggggttcctgtccctcatgagagattcaaagacaaggttttttacgtctggtttgatgca
ccgattgggtatgtctcgatcacttcgtgttacacacctgagtggagattatggtggcaa
aatcctgaaaatgtggagttgtatcagtttatgggaaaggataatgtaccctttcacact
gtaatgtttccctctactcttcttggaactaatgagaactggacattgatgaagaccatc
agtgtaacagagtacctaaactatgaaataggtgtgttttatgcttttctctctacagaa
agtaaattctggaagctttacaaggaagatctaccttcatgttccatagtcatgaaaact
tcagtgggagtagtttatcttcttgcttgcctgttagagccttttatgccctcattttcc
attaaggtactgaagcaactttctttgcccctccaactttccctctctgatgagaaggga
gatgtagggaaggccaaaaggccatgggaactggtacctgctggccacaaaattgggata
cctgctggccacaaaattgggaaagatgagcgtttatttcaagaactgaatgatgaagac
gtggaaaagtttaggacaaagtatgatggcagtcaagctgaacgagttgccaaagcaaaa
agccccactactgaattgaacaactcaaagagtttaattattttggctctttgcctctct
ctcatgttattatgtgtgtacatacaaggatcttgttga
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