Erigeron canadensis (horseweed): 122596568
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Entry
122596568 CDS
T07610
Name
(RefSeq) anaphase-promoting complex subunit 4 isoform X1
KO
K03351
anaphase-promoting complex subunit 4
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122596568
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122596568
03036 Chromosome and associated proteins [BR:
ecad03036
]
122596568
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Other subunits
122596568
Chromosome and associated proteins [BR:
ecad03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
122596568
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANAPC4
ANAPC4_WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR19_1st
WD40_Prp19
WD40
Beta-prop_WDR35_TULP_N
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
EIF3I
Beta-prop_IFT122_1st
Beta-prop_VPS8
Beta-prop_HPS5
Beta-prop_LRRK2
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
122596568
NCBI-ProteinID:
XP_043625111
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Position
4:18588480..18596551
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AA seq
756 aa
AA seq
DB search
METDEDQEEVSRILPFQLQFDKPLSFQIKIAEWNPEKDLLAMVTDDFKISLHRFNWQRLW
TISPGRCITSLCWRPDGKAIAVGLQDGTISLHDVENGKLLRSMKSHTNAVVCLNWEDDGG
GEAAEDKFYNAKYEDRTSRFFPPPPRAPRVPGLVAGDENENLSQELSSSSHQRFNILCSA
DIDGIISFSIFGIFPIGKIDIHEYSVRSPLANKRADCKLLNASICKVALSKDLCHLAVLC
SGELQVPEHDLHGFYCVTLDTSIFYKRRNELHQVAQQASNIEDLTEVIRASLSVMSKQWS
DAMHTFHDKFDSLSRLIHDHGLDSTPQEEFLSLLGGARTSPAVHQFLENSLGEVGLKRIT
KLVCGAGKELQVIVLEHLQPAAEMIGFRLGELRGLSKWRSRFKSVGLDETLTDNATEKAG
MLLVQIERFMRVLSSSVQQFSNFFNWLQKCVKMLMSEPIDQHQLLPFKSELVILFLKYLY
DEDPVKRLLELSEVDHSIEVDSETMGRVQELAHFGGFKDVDYLRRTLANEFQQMESCFKE
AFQMPYTTISKTILCQSLLPLFPIKSSPNSTLSTVPTSISYYKESSDSGVMHKPEQRFVD
YVSFRLPDEPSSDLANCIAVARCLTNDLEAVLLCLPDGYHCVDLSLYKECQLVLLLNGPS
SSESSEKACMMIVQANDLPFVSIPTFGASSPWRLHELQDSIAYLQMDSLKVRGIPHSVIA
PLAVSASRGVACVFATRKRALVYILDEDEDEVSDAE
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atggaaacagatgaagatcaagaagaggtttcaagaatccttcctttccagcttcagttc
gacaaacctctttctttccagataaaaatagctgaatggaacccggagaaagatttgctg
gcgatggttaccgacgatttcaagatttctttgcatcgctttaattggcagaggctttgg
actatttctccaggaaggtgcataacatctctatgttggcgtccggatggtaaagcgata
gctgttgggcttcaagacgggactatctcattgcatgatgttgaaaatgggaagctgtta
cgaagcatgaaatcccacacaaatgctgtagtatgccttaattgggaggatgatggaggt
ggggaggctgcggaagataaattttacaacgcaaaatatgaagaccgcacctcccgtttc
tttcctcctcccccaagagctcctcgagtgcctggacttgtggctggagatgaaaatgaa
aatttatcacaagaattatcaagttcctcgcatcagcgttttaacatcttgtgcagtgca
gatatagatggaatcatcagttttagtatatttgggatatttccaattgggaaaattgat
atacacgagtattctgttcgtagtccccttgcgaacaagcgtgctgactgtaaacttctg
aatgcttcaatctgcaaggtagccctgtcaaaagatctctgtcatttggcagtgttatgc
tctggtgagcttcaagttccagaacatgatttgcatggtttctattgcgtaactcttgat
acctcaatattctataaaaggagaaatgagcttcaccaagttgcacaacaagcttcaaac
attgaggatttgactgaagtcatccgagcttcactatctgtcatgtcaaagcaatggtct
gatgcaatgcacacatttcatgacaagtttgattctctctctcgtctgattcatgaccat
gggttggactctactccacaagaggaatttcttagcctattaggtggtgcccgcacgagt
ccagctgtccaccaatttttagagaattctcttggtgaagtgggtctcaagagaataaca
aagttggtttgtggtgctggaaaagagcttcaggttatcgttcttgagcatctacagcct
gctgcagagatgattggatttagattgggagaactgagaggcctttctaagtggcgttca
cgttttaaaagtgtcggtttggatgagactttaacagataatgcaacagagaaagcgggt
atgctgctcgttcaaatcgaacgatttatgagggttttatcctcttccgtccaacagttt
tcgaacttcttcaactggcttcaaaaatgtgtgaaaatgttgatgtcagaaccaattgac
cagcaccagcttctcccatttaaaagtgaactggtcattttgttcttgaagtatctatat
gatgaagatccagttaagcggttgctcgaattgtctgaagttgatcacagtattgaagtt
gactcggagacgatgggaagggtacaagaattggctcattttggtggttttaaagatgtt
gattacttgcgaagaacgttagcaaacgaatttcagcaaatggagtcttgctttaaagag
gcctttcagatgccttacactacaatctccaaaacaatactctgccaaagcttgctaccg
ttgtttcccatcaagtcttcgccaaattctacattgtccaccgttccgacatctatatca
tattacaaggaatcctcagacagtggtgtaatgcataagccagaacagaggtttgttgat
tatgtatcattcagattacctgatgagccttcttcggaccttgcaaattgcattgctgtt
gcaagatgtttaacgaatgacttagaagctgtcttgttatgccttcctgatggctatcac
tgtgttgatctgtctctatataaggaatgtcaacttgttctactattgaatgggccatct
tcttctgaaagctcagagaaagcttgtatgatgatagtgcaagccaatgatcttccattt
gtatctatacctacttttggtgcttcaagcccttggagattgcacgaacttcaggactcc
attgcatatttgcaaatggatagtttgaaagttaggggaatccctcatagtgtgatcgct
cctctggcagtaagcgcatctagaggtgttgcatgtgtcttcgcaacaagaaagcgtgct
ttagtttacattttggatgaagatgaagacgaagtctcagatgcagaatag
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