KEGG   Erigeron canadensis (horseweed): 122596644
Entry
122596644         CDS       T07610                                 
Name
(RefSeq) SKP1-like protein 12
  KO
K03094  S-phase kinase-associated protein 1
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad03083  Polycomb repressive complex
ecad04120  Ubiquitin mediated proteolysis
ecad04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    122596644
   04120 Ubiquitin mediated proteolysis
    122596644
  09126 Chromosome
   03083 Polycomb repressive complex
    122596644
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ecad04131]
    122596644
   04121 Ubiquitin system [BR:ecad04121]
    122596644
   03036 Chromosome and associated proteins [BR:ecad03036]
    122596644
Membrane trafficking [BR:ecad04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    122596644
Ubiquitin system [BR:ecad04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     122596644
   Cul7 complex
     122596644
Chromosome and associated proteins [BR:ecad03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     122596644
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     122596644
SSDB
Motif
Pfam: Skp1 DF306_C
Other DBs
NCBI-GeneID: 122596644
NCBI-ProteinID: XP_043625191
LinkDB
Position
4:complement(43686995..43688051)
AA seq 192 aa
MGQEEEERVDDEYEGEEKPYYQLDDGKFEVTYEHITESKGIRMLFQYGWAGELPGAIEGV
RGPIVRKAFDFCKARGEVKKQHWKDGEIILQQKLKLFDDKFFQENHSDAIDLSDVACRLK
IRSLFYLMKERAAEMLAEKTPDDIRKHFRVRYVADEITDREVRRMKRVVSIAPWAFRSCS
SRTSLNPVVSDA
NT seq 579 nt   +upstreamnt  +downstreamnt
atgggccaagaagaagaagaacgggtcgacgacgagtacgagggggaggagaagccgtat
tatcagttggatgatggaaaattcgaggtcacctatgagcatatcacggagtctaagggc
atccgtatgcttttccagtatggatgggctggtgagttacctggcgctatcgaaggcgta
cgtggccccatcgttcgaaaggcttttgatttctgcaaggcacgtggggaggtcaagaag
cagcattggaaagatggtgaaatcatcctccaacaaaaattgaagcttttcgatgacaag
tttttccaagaaaatcattccgatgctattgatctctccgatgtggcttgccgtttgaag
atcagaagcctcttttacctgatgaaggaacgtgctgctgaaatgctcgctgagaagact
cccgatgacattcgcaagcacttcagagtacgttatgtggcagatgaaattactgatcgt
gaggtacgtaggatgaaaagggtggtcagtatcgctccttgggcttttcgctcttgttca
agtcgcactagcttaaatcctgtggtttcagatgcgtaa

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