Erigeron canadensis (horseweed): 122596661
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Entry
122596661 CDS
T07610
Name
(RefSeq) transmembrane E3 ubiquitin-protein ligase FLY1-like
KO
K23788
transmembrane E3 ubiquitin-protein ligase [EC:
2.3.2.27
]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122596661
Enzymes [BR:
ecad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122596661
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122596661
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-RING_11
zf-RING_5
zf-C3HC4_3
DUF2921
zf-C3HC4
PHD_NSD
zf-ANAPC11
zf-RING_UBOX
zf-RING_16
zf-RING_Vps41
Prok-RING_4
zf-RING_10
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
122596661
NCBI-ProteinID:
XP_043625215
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All DBs
Position
4:13030833..13051934
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AA seq
560 aa
AA seq
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MGWFKVNEIRVFLFLGLLLLFLYYQQPVLGLRPLRQMTTARPDEWLVVRKDENESGPFSA
WNITGTYRGAWRFLQYSNNSNRFSDFMKSSGNSVLELITRPTKINGVHYVEGVMIFHDVF
DNEPQVGRVQIRVEGVYIWPFRQLRMVANSGREGEFGQDEDYILSNPYHLLGVFSSQVFQ
ESSRDKIWKSKQLPISDMDKHCNVEISAQISRVSSTQNDGEHDRYYMEGLMESPSADDDG
DCFSPMLMNATSVDIEVYYNKAVNYTLMVTFISFLQVLLLIRQMEHSNTQSGAAKVSIVM
IGQQAIMDAYLCLLHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKASRSMNT
GESWEAMRRELSVLYSRFYGILLGGILIMYEFHKYLHPILLILHSFWIPQIITNIVRDSR
KPLHPHYIVGMSLTRLAIPVYVFGCPHNFMRIEPDERWCISLGVLVGFQAAVLLLQHYLG
SRCFIPRQILPEKYCYFRRVNQDSINASDCVICMTAIDLTQRPNDCMVTPCEHFFHSGCL
QRWMDIKMECPTCRRSLPPA
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggggtggttcaaagttaatgaaattagggttttcttattcttagggctgttgttgttg
tttctatattatcagcagcctgttttaggattaaggcccttgaggcagatgaccacagct
cggcccgatgagtggctcgttgtgaggaaagatgagaatgaatcgggtccgttttctgca
tggaatataactgggacttacagaggggcatggaggttccttcagtattcaaataactct
aacaggttttcagattttatgaaatcaagtgggaattctgttttggagttgataactagg
ccaactaaaataaatggtgtacattatgttgagggtgtaatgatatttcatgatgtgttt
gataatgaacctcaagttggccgtgtccaaattagagtagaaggtgtctacatatggcca
ttcagacaacttcgaatggtagctaacagtggaagagagggagagtttggtcaagacgag
gattatatactatccaacccataccacctgcttggagttttctcatcacaagtcttccag
gagtcttcacgggataagatctggaagagtaaacaactcccaatcagtgacatggataaa
cactgtaatgttgagatctctgctcaaatttctcgtgtctcgtctacccaaaatgatgga
gagcatgatcgttattacatggaaggcctaatggaaagcccttcggctgatgatgatgga
gattgcttctcacccatgcttatgaatgctacttcagtcgacatagaggtttactacaac
aaagcagttaattacacattaatggtcacctttatatcgttcctccaggttcttcttcta
attcgacagatggagcatagtaacacacaatctggggctgcaaaagtttcaattgtaatg
attggacaacaggctatcatggatgcctatctttgccttttacatttgactgcagggata
ttagttgagtcactgttcaatgcgttcgcaactgctgctttttttaagtttgttgtattc
tcaatctttgagatgagatatcttcttgctatatggaaggcaagtcggtctatgaatact
ggagaaagctgggaagctatgagacgtgaactttcagttctttacagtagattttatgga
atccttttaggtggtatactgatcatgtatgagttccacaaatatctgcaccctatactt
ctaattttgcactcgttttggattccacaaattatcaccaacattgttcgtgattcaaga
aaaccgttgcaccctcattatatagtgggaatgtccctgactcggcttgcaattcctgtt
tatgtgtttggatgtcctcacaacttcatgcggatcgaacctgatgagaggtggtgtatt
agcttgggtgtccttgttggtttccaggctgcagttctcctcttacaacactatcttgga
tcccgatgctttattcctcgccagattttgcctgaaaaatattgttattttagaagggtt
aatcaggactctattaatgctagtgattgtgtcatttgcatgactgcaattgatcttact
cagcgtccaaatgattgcatggttactccatgtgaacattttttccactctggctgttta
caaagatggatggatataaagatggagtgccctacttgccgacgttcactcccaccagct
taa
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