Erigeron canadensis (horseweed): 122596671
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Entry
122596671 CDS
T07610
Name
(RefSeq) E3 ubiquitin-protein ligase AIRP2-like isoform X1
KO
K25840
E3 ubiquitin-protein ligase AIRP2 [EC:
2.3.2.27
]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122596671
Enzymes [BR:
ecad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122596671
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122596671
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
zf-C3HC4
Prok-RING_4
zf-C3HC4_2
RING_XB3-XBAT31
zf-RING_5
zf-RING_UBOX
zf-RING_4
zf-rbx1
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
122596671
NCBI-ProteinID:
XP_043625224
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All DBs
Position
4:19737299..19742463
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AA seq
247 aa
AA seq
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MYAGSMTKSFKDSLKVLEADIQHANTLASDFPREYDGACVQMRMSYSPAAQFFLFFVQWS
DCHLAGALGLLRVLIFQVYADGTTTMSTHERKASIREFYGVIYPSLMQLESGVTDSEERK
QKKVCMERYRKREDDDYNRYSDVDIEREEECGICMEMNSKLVLPKCNHAMCSNCYNDWRT
RSLSCPFCRVSLKRVDSGELWVYVDYKEAVDMATITKENLKRFFMYIDKLPLVIPDSNFD
TYDSHLM
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcgggatcaatgacaaaatcatttaaagattcactcaaagttcttgaagcagat
attcagcatgctaatactctggcatctgattttccaagggagtatgatggtgcgtgcgtg
cagatgagaatgtcatatagtccggctgcacaatttttccttttctttgttcagtggtca
gactgccaccttgctggtgctcttggactcttgagggtcttgatttttcaggtttatgcg
gatggtaccaccaccatgtctactcatgaaaggaaggcaagcataagggaattttatggt
gtcatatatccatctttgatgcaacttgaaagtggtgtgacggattcagaagagagaaag
caaaagaaggtatgcatggaaaggtatagaaaaagagaagatgatgattacaatcgttat
tctgatgttgacattgaacgagaagaagaatgtggtatctgcatggagatgaatagcaag
ctcgtgttacccaaatgtaatcatgccatgtgctcaaactgctacaatgactggcgtaca
aggtcactttcatgcccgttttgccgagtcagcctaaagcgagtcgactcaggcgagctg
tgggtgtatgttgattataaagaggcagttgacatggccacaataacaaaagaaaatcta
aaacgattcttcatgtatatagacaagctgcctcttgttattcctgactcgaattttgac
acctacgattcacatttgatgtaa
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