Erigeron canadensis (horseweed): 122596715
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Entry
122596715 CDS
T07610
Name
(RefSeq) two-component response regulator ORR26-like
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
122596715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecad03000
]
122596715
Transcription factors [BR:
ecad03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
122596715
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
efb-c
Motif
Other DBs
NCBI-GeneID:
122596715
NCBI-ProteinID:
XP_043625274
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Position
4:complement(1005347..1007795)
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AA seq
552 aa
AA seq
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MPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMRGVQHGACDYLLKPIRMKELRNIWQH
VYRKKIHEVRDTESHEGLEEILMMRNVSEHSDDGYMLNGGDMTPGKKRKDADYKYDDKDF
ADHSSLKKARVVWTVDLHQKFVRAVNLIGFEKVGPKKILDLMNVPWLTRENVASHLQKYR
LYLTRLQKDDLKTSSSGLKHPDFSPRDAAGEPTDPSQMQQKEAVVSYHTPANTRIHEVDV
KGTPPLQTIEPKKVLTGYAANIVNNGINQSFGTAQYSTFNSILPTQCSWNGGFTEIQFKH
EHNPNFQAQNGLNKLGLPTQQMQSIPHGPPFSKERDKPANAASYSALSQNLMRGFQSPDP
VTSSTWSMKDDQQVQTIAHVPPFSKEREEQDNSSSYSALSQNRMPSNESPNPVASSTWGV
KDDQQVQSIAHGSPFSKGRHKPANSSTYSVLSQNVMPSFQPPDPVTSSTWSMKDDQSLEQ
SSIDNLELSPFSLQGQHCSSTYLDMQNKGLPECNDPEFITDSSNLYDALRFDYEYPPDSL
EYPVIYQGLFIA
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgcctgatatggatggtttcaagcttctggagcatgttggacttgagatggatcttcct
gtcataatgatgtctgttgatggagaaacaagcagagttatgagaggtgtccaacacggg
gcatgtgattatctactgaagccaattcgaatgaaggaactcagaaacatatggcaacat
gtttacaggaaaaagatacatgaggtgagagatactgaaagtcatgaaggccttgaagag
attctaatgatgagaaatgtatctgaacattctgatgatggctacatgcttaatggtggt
gacatgacgccaggtaagaaaaggaaagatgctgactataagtatgatgacaaagacttt
gccgatcattcttctctcaagaaagcaagagttgtttggaccgtggatcttcatcagaaa
ttcgttagagctgtgaatcttatcggttttgaaaaagttggtcctaagaagatacttgat
ctcatgaatgtgccatggttaaccagagagaatgttgcaagtcacttgcagaaatatcgt
ctctacttaactcggttacagaaagatgatcttaaaacctcatccagtggactaaagcac
ccagatttttctccaagagatgcagctggagaacctacagatccttcacagatgcaacaa
aaggaagccgtcgttagctatcacacgcccgccaacactagaatccatgaagttgatgtg
aaaggtactcctccattgcagacgatagaacccaagaaagtattgactgggtatgcagcc
aacattgtaaacaacggaattaaccaatctttcggcacagctcagtactccacatttaat
tccatattgccaactcagtgctcttggaatggaggttttacggaaattcagttcaaacat
gaacacaatccaaactttcaggcacaaaatggcctcaataagcttggactgccaactcaa
cagatgcagtccattccccatggaccaccgttcagtaaagaaagagacaaaccggctaac
gcagcctcatactctgcattatcccagaaccttatgcggggcttccaatcacctgatccc
gttaccagttcaacgtggagtatgaaagatgatcaacaagtgcagaccattgcccatgta
ccccctttcagtaaagaaagagaggagcaggacaactcaagctcctactctgcattatcc
cagaaccgtatgcctagcaatgaatcacctaatcccgtcgccagttcaacatggggtgtg
aaagatgatcaacaggtgcagtccattgcccatggatcacctttcagtaaaggaagacac
aaaccggctaactcaagcacctactctgtgttatcccagaatgttatgccaagcttccag
ccacctgatccagtcaccagttcaacatggagtatgaaagatgatcaaagtttagaacaa
agttccatagataatctggaattgtcacctttttcacttcaaggtcaacattgctcttca
acatatcttgacatgcaaaacaagggattaccagagtgtaatgatccagagttcattact
gattcttcaaacttatacgatgcactaaggttcgactatgagtacccccctgactcattg
gaatatccagtaatatatcaaggcctgtttatagcctga
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