KEGG   Erigeron canadensis (horseweed): 122596764
Entry
122596764         CDS       T07610                                 
Name
(RefSeq) SKP1-like protein 12
  KO
K03094  S-phase kinase-associated protein 1
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad03083  Polycomb repressive complex
ecad04120  Ubiquitin mediated proteolysis
ecad04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    122596764
   04120 Ubiquitin mediated proteolysis
    122596764
  09126 Chromosome
   03083 Polycomb repressive complex
    122596764
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ecad04131]
    122596764
   04121 Ubiquitin system [BR:ecad04121]
    122596764
   03036 Chromosome and associated proteins [BR:ecad03036]
    122596764
Membrane trafficking [BR:ecad04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    122596764
Ubiquitin system [BR:ecad04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     122596764
   Cul7 complex
     122596764
Chromosome and associated proteins [BR:ecad03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     122596764
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     122596764
SSDB
Motif
Pfam: Skp1_POZ
Other DBs
NCBI-GeneID: 122596764
NCBI-ProteinID: XP_043625327
LinkDB
Position
4:43664617..43667172
AA seq 182 aa
MSRLEEEWENPFLTLDDGKFEITVEYITESRPIRMLWEHRWVGELPAPIEGKSSTIIRKA
LDFCEERGNIKKQHWKDRNTLQQKLKLFDDKFFQANHSDATDLADVACCLHIRSLFCLMK
ERATEMLFEKTPDEVNELFKIRYVADEATAADDLRKMKMVIRNAGWAFRLLSSFLNPVVS
DA
NT seq 549 nt   +upstreamnt  +downstreamnt
atgtctcgtcttgaggaggaatgggagaatccgtttttaacgttggatgatggaaaattc
gagatcacggtggagtacatcaccgagtctaggcccatccgtatgctttgggagcataga
tgggtgggtgagttacctgccccaatcgaaggcaaaagcagcaccatcattagaaaggct
cttgatttctgcgaggaacgtggaaatatcaagaagcagcattggaaagatagaaacacc
ctccaacaaaagttgaagcttttcgatgacaagttttttcaagccaatcattccgatgct
actgatctcgccgatgtggcttgctgtttgcacatcagaagcctcttttgtctgatgaag
gaacgtgctaccgagatgctctttgagaagactcctgatgaggttaacgagctctttaaa
atacgttatgtggcagatgaagctactgctgccgatgacttacgtaagatgaaaatggtg
atcaggaatgctggttgggcttttcggcttctctcaagctttttaaatcccgtggtttca
gatgcttaa

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