Erigeron canadensis (horseweed): 122596766
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Entry
122596766 CDS
T07610
Name
(RefSeq) VAMP-like protein YKT61
KO
K08516
synaptobrevin homolog YKT6
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
122596766
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122596766
Membrane trafficking [BR:
ecad04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
122596766
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Gene cluster
GFIT
Motif
Pfam:
Synaptobrevin
Longin
DAXX_hist_bd
Peptidase_M61
PSME4_C
Motif
Other DBs
NCBI-GeneID:
122596766
NCBI-ProteinID:
XP_043625330
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All DBs
Position
4:39706818..39709457
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AA seq
201 aa
AA seq
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MKITALLVLKCHPIPDGSDPVILANATDVSHFGYFQRVTVRQFIVFVGRTVAKRTPPDQR
HTVQHEEYKVHSYNRNGLCVVGFMDDHYPVRSAFSVLNQVIDEYQKKHGDSWKSVQADKT
DQWSYLNDALTKFQDPAQADKLLKIQRELDETKIILHKTIDSVLERGEKLDSLVEKSSDL
SAASQMFYKQAKKSNQCCTIL
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcacggcattacttgtgttaaaatgccacccaataccagacgggtcggatccg
gtgatacttgccaatgcaacggatgtgagccattttgggtatttccaacgtgtcaccgtc
aggcagtttattgttttcgttggtaggaccgttgctaaacgaaccccgcccgatcaacgt
cacaccgtccaacacgaagagtataaggtgcattcatataacagaaatggtctctgtgtt
gtggggttcatggacgatcactatccagtcagaagtgcattctctgtgttgaaccaggta
atagatgaataccagaagaagcacggtgattcgtggaagagtgtacaagcagataaaacc
gaccaatggtcttatcttaatgatgctttaacaaagtttcaggatcctgctcaggctgac
aagctgttgaaaattcagcgagagttggatgaaaccaaaattatccttcataaaaccatt
gacagtgtcctcgaaagaggcgaaaagctggacagtttagtcgagaagagttcagatctc
agtgcagcttcgcagatgttctataagcaggcaaaaaaatccaatcaatgctgtactatt
ttgtga
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