Erigeron canadensis (horseweed): 122596772
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Entry
122596772 CDS
T07610
Name
(RefSeq) DNA replication ATP-dependent helicase/nuclease JHS1
KO
K10742
DNA replication ATP-dependent helicase/nuclease Dna2 [EC:
5.6.2.3
3.1.-.-]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
122596772
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ecad03032
]
122596772
Enzymes [BR:
ecad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
122596772
DNA replication proteins [BR:
ecad03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
122596772
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
122596772
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dna2
AAA_12
AAA_11
AAA_30
AAA_19
PDDEXK_1
Cas_Cas4
UvrD-helicase
nSTAND3
ResIII
AAA_29
PhoH
Motif
Other DBs
NCBI-GeneID:
122596772
NCBI-ProteinID:
XP_043625334
LinkDB
All DBs
Position
4:complement(23048102..23061073)
Genome browser
AA seq
1373 aa
AA seq
DB search
MAPRKKPITSSSGSKKQNQQNSSQNPTKFGIQHFFERHTQNSQKPNIPKNPSAQSNLGSD
PKIPINPVSTKSTESVPLFNNNQDNSSSANLGVNVINPKNRNDNAKSDFENDLGSGNLKN
DGNKSGSESTPVEDLIPVEMDVLEVSPEFCKSVSRKRIKFSPGMLIDQSQDDGGDEVTWR
ISPVNEKLNALTKNLLEVQVRKVLGESSRFNIMKSKQNFDNKISPPEKSTENSFKFLKAI
NLEKRNLEQDLLLYGNNEKATDDNNIDCRSPFKTPPSCHDKTSDNGDVNEELTQLGSRQH
KKALLDLLDQVENVISVEDTDTKSSLTSCKNKRYIEILGGADVSVEGPSVGSTEKVKAEP
PNVKFLVFEVSEKQFVGKNGSQCLSKVLRLLNEQCGEEQSVYLSDEWFYSVIAPGDTVHV
IGEFNEGKCDVNRDKNFLIVHPDILVSGTRVAGSFSCPRRTVLDERLKNNEQSASALVGT
LLHQLFQAGLIRETPTKEFLEEYARVLLQKNYESLYACGVHEGDIHKTMIEAIPRLLSWI
LHFRDSKVPSSSVDFGSSDGVKKVKISEVIDIEEMAWAPKYGLKGVIDASLHVKAASNAH
QINDFIMPLEFKTGKATNGQAAMEHNAQVKLYTLLMSERYKKNIDYGLLYYLHTDQTQGV
AVRRSDLVGLIMRRNELASDILKASMTQQLPPMLQVPNMCKSCRHLNACTVYHKVHNGSI
EGSGLGDVYSSLVNHLTTAHCSFLKKWERLIDLEANELETVKKEMWNSNSWNSTNSNTCL
SSIVLDPSDQIPHNKVTQSNRFVYRFVRQVHDTKDSNPSSSGKDLESSLKTGDYVILSTD
PDRLVAGRGVIMDLTRINVTVSFSKRLRLPGSSPKIIHDLRQEVWRIDKDEFTASFATMR
FNLIQMFLQDDRSSHLRSMIVDLHAPRYDGGCIFSQDPAVSYIWSEKTLNNDQRKAILKI
LTAKDYTLILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQGIDFI
RIGREEAVHEEIRGHCINAVDMQSTKDIKQRLDEAKVVAVTCLGITSPLLSDMKFDVCIM
DEAGQITLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMAVSLFCRLSEAHPQAI
SALQSQYRMCAPVMELSNALIYGDRLRCGSPDVANAKLEYTRSTSCSSWLKKVLDPLNQV
IFINTDLVPGLEVKDCKTVNNPLEAYIITEITDKLTCQGIRGEDIGVITPYNAQANLIKQ
YVLNSVEIHTIDKYQGRDKDCILVSFVRSSNNPKNCKSSLLGDWHRINVALTRAKKKLVM
VGSQRTLSYVPILKLLIEKVEEGSSILNMKKDDIDINKHHLKRCSHSKGDCKL
NT seq
4122 nt
NT seq
+upstream
nt +downstream
nt
atggcacccagaaagaaacccatcaccagcagcagcggatccaaaaaacaaaaccaacaa
aactcgtcacaaaaccccaccaaattcggcatccaacatttcttcgaacgccacacacaa
aactcacaaaaacccaatatccccaaaaacccatctgcccaatccaatcttgggtcggat
cctaaaatacccatcaacccagtttccactaaaagtactgaaagtgtccccctttttaat
aataatcaagataatagtagcagtgctaatttgggggtaaatgtaataaaccctaaaaat
agaaatgataatgcgaaaagtgattttgaaaatgatttgggatctgggaatttgaaaaat
gatggaaataaaagtgggtctgaaagtacacctgttgaggatttgattccagttgagatg
gatgttttagaggtttcgccggaattctgcaagtcggtttcgcgtaaacggataaagttt
tcgcctgggatgctgatagatcaaagccaggatgatgggggtgatgaggttacatggagg
atttctcccgtaaacgagaagcttaatgcattaacaaagaatttattagaagttcaagtg
cggaaagttttaggagaatcttcgcggttcaacattatgaaatctaaacaaaattttgat
aataagatttcacctcctgagaaatctactgaaaattctttcaaattcttaaaggcgatt
aatttggaaaaacgcaaccttgaacaagatttgttgctgtatggtaataatgagaaagca
actgatgataataatatagattgcaggagtccttttaagactccaccatcatgtcacgat
aagacttctgataatggtgatgttaatgaagaattaactcagctgggttcaaggcaacac
aaaaaggcattactcgaccttcttgatcaagtagaaaatgtaatcagtgttgaagataca
gataccaaaagctcattaacttcatgtaaaaataaacgctatattgaaattcttggcggg
gctgatgtttccgtggaagggccatcagtgggctccaccgaaaaggtcaaggcggaaccc
cccaatgtaaaatttcttgtgttcgaggtatccgaaaagcagtttgttggtaaaaatggt
tctcagtgcttatcaaaggttttaaggttactgaatgagcaatgtggagaagagcagtct
gtgtatttgtcagatgagtggttttatagtgtcatagcacctggagatactgtacacgtt
attggtgaattcaatgagggaaaatgcgatgtgaatcgtgacaaaaattttcttatcgtt
cacccggatatattggtgtctggaactcgggttgctggtagtttcagctgccctcgtcgc
actgtactggacgagagactgaagaataatgagcagtcagcttcagcactagtcggcacc
ttgttgcaccaactctttcaggctggacttattagggaaactccaaccaaagagtttctg
gaggagtatgcaagagtcttgcttcaaaagaattatgagagcctatacgcctgtggagta
catgaaggtgatattcacaagaccatgattgaggcaatcccacggttattaagctggatt
ttgcacttccgagattcaaaggttccttcttctagtgttgattttggctccagtgatgga
gttaaaaaggtgaaaatatctgaggttattgatattgaggagatggcatgggctccaaaa
tatggcttgaaaggagttatagatgcatctttgcatgtaaaagctgcttctaatgctcat
caaatcaatgattttatcatgcccctagagtttaagaccggaaaagcaaccaatggacag
gcggccatggaacataatgcccaagtgaagttgtacacccttcttatgtccgaaaggtat
aaaaagaatatagattatggtctgctatattatctccacacagatcagacacaaggagtt
gcggttcgaaggtctgacttggtcgggctaattatgcggcgtaatgagcttgcaagtgat
attctgaaggcatcaatgacacaacaacttccaccaatgctgcaggttcccaacatgtgc
aaaagttgccgccaccttaatgcttgtacagtataccataaggtacacaacggtagcata
gagggaagtggattaggtgatgtctacagttcacttgtgaaccacttaacaactgcccat
tgtagctttcttaagaaatgggaaaggttgatcgacttagaagcaaatgaactggagact
gtgaagaaagaaatgtggaactcaaatagttggaacagtacaaattcaaatacttgttta
tcctccattgttcttgacccttcagatcaaattccacataataaagtcactcaaagcaac
cggtttgtttatcgttttgttcgccaagtccatgacacgaaggattcaaatccttcatcc
tcgggaaaggatctggaaagttcacttaaaactggggactatgtgatcttgagtactgac
cctgatcgtcttgtggctggaagaggtgttataatggatttaactcgtatcaatgtcacg
gtttctttctcaaagcgcttaaggcttccagggagcagtcctaaaatcatccatgatctt
cgtcaagaggtttggcggattgataaagatgaattcacagcatcatttgcaacaatgaga
ttcaacctcattcaaatgtttctacaagatgatagaagctcccacctccgaagtatgatc
gtagaccttcatgctcctcgatatgatggtggctgtatattcagtcaagatcctgctgta
tcatacatttggtcagagaagactttaaataatgatcagcgcaaagcaatactaaagata
cttacagccaaggattacacacttattctaggaatgccaggtactggcaagacatccaca
atggtccatgctgtgaaggcattattaatgagaggtgcttccatattgcttacatcctac
acaaactctgctgttgataatttgcttatcaagttgaaatctcagggcattgattttata
cgtattggtagagaggaagccgtgcatgaggaaattcgtgggcattgtattaatgctgtt
gatatgcaaagcaccaaagatattaagcagagactagacgaagccaaagttgttgcagtg
acatgcttagggataaccagccctctgctttctgacatgaaatttgatgtttgcattatg
gatgaagctggacaaatcactctccccgtctcattaggacctttgatgttcgcatcaaag
tttgtactcgtgggagatcattatcaattgcctccacttgtgcagagtactgaagctagg
gaaaatggaatggctgtaagtctcttctgcagactttcagaagctcatccccaggcaatt
tcagccttacaaagccagtaccgtatgtgtgcaccagttatggagctatccaatgcctta
atatatggtgataggttacgttgtggttctcctgatgtggcaaatgcaaaactcgagtat
acaagatcaacatcttgttcatcatggctaaagaaggtattggatccactcaatcaagta
atattcatcaatacagatcttgtgcctggtttagaggtaaaagattgtaagactgtaaat
aatccacttgaagcatacataatcacagagataactgataaactaacttgccaaggtatc
cgtggtgaagatattggtgttataactccttacaacgctcaggctaacctcattaaacaa
tacgttttaaactcggtggagatacatactattgacaaataccagggaagggataaggat
tgcatcctggtatcgtttgtaagatcaagcaacaacccaaaaaactgcaaatcctcactg
cttggggactggcataggattaatgtggcccttacccgtgccaagaaaaagctagttatg
gtcgggtcacagagaacactgtcgtatgtaccaatactgaagcttcttatagagaaggta
gaagaaggatcttccatattgaatatgaaaaaagacgatattgatattaataaacaccac
cttaagagatgctcacactcaaaaggtgattgtaagttgtaa
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