KEGG   Erigeron canadensis (horseweed): 122596786
Entry
122596786         CDS       T07610                                 
Name
(RefSeq) SKP1-like protein 12
  KO
K03094  S-phase kinase-associated protein 1
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad03083  Polycomb repressive complex
ecad04120  Ubiquitin mediated proteolysis
ecad04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    122596786
   04120 Ubiquitin mediated proteolysis
    122596786
  09126 Chromosome
   03083 Polycomb repressive complex
    122596786
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ecad04131]
    122596786
   04121 Ubiquitin system [BR:ecad04121]
    122596786
   03036 Chromosome and associated proteins [BR:ecad03036]
    122596786
Membrane trafficking [BR:ecad04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    122596786
Ubiquitin system [BR:ecad04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     122596786
   Cul7 complex
     122596786
Chromosome and associated proteins [BR:ecad03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     122596786
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     122596786
SSDB
Motif
Pfam: Skp1 Skp1_POZ
Other DBs
NCBI-GeneID: 122596786
NCBI-ProteinID: XP_043625355
LinkDB
Position
4:42369959..42371014
AA seq 202 aa
MSKSRSDAISRGFNGVSSAYRGPRPKLPVCCYDDDDECKIDQKPRYSKPRKIINCALYLV
VKSVDGPNFRVDELSCGESIVLKETIEWRPRDTTYVEIYSHILEKVVYFLDNHVRLKNSD
DHQKLKDFHSNFFKQNQTHFLALMEAAAVLQIHSLFDLTSEAVVDMIRGKTEEEILRIMN
LDDHFTYQQMAEIEKEHGWWAF
NT seq 609 nt   +upstreamnt  +downstreamnt
atgtcaaaaagtagatccgatgcaatttcgcgaggttttaatggcgtgtcaagtgcttat
cgcgggccgcgtcctaaacttccggtatgttgttatgatgatgatgatgaatgtaaaatc
gaccagaagccgcgttatagtaagccgagaaagataattaattgtgctctgtatctagtg
gtaaagagtgttgacggtcccaacttccgggtcgatgaattgtcgtgtggtgagtccatt
gttttgaaggaaactatagagtggagaccacgtgacacgacctatgtcgagatttatagc
catatcctcgagaaggtcgtgtatttccttgataaccatgttcggctcaagaactcggat
gaccatcagaagctgaaagacttccattccaattttttcaaacaaaatcaaacccatttt
cttgctctcatggaagctgctgcagtgctccaaattcatagcctcttcgacctaacgagt
gaagcggttgtcgatatgatcagagggaagactgaagaagagattcttaggatcatgaac
ctggacgatcatttcacttatcaacagatggcagagatagagaaggaacatggctggtgg
gcattttaa

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