Erigeron canadensis (horseweed): 122597345
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Entry
122597345 CDS
T07610
Name
(RefSeq) DNA-3-methyladenine glycosylase-like
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
122597345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecad03400
]
122597345
Enzymes [BR:
ecad01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
122597345
DNA repair and recombination proteins [BR:
ecad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
122597345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
Motif
Other DBs
NCBI-GeneID:
122597345
NCBI-ProteinID:
XP_043625881
LinkDB
All DBs
Position
4:29365658..29368230
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AA seq
325 aa
AA seq
DB search
MSKENVRRNVVEKNNSSPNLRRTKEKPSSTQSLLSKHLKKVYPVGIHKTSSLLSLSSLSL
TLSHNSSGSFTDSSTTLEQTISSALQLIAPTPTPAPAPRSREVPITKTSVHSPVPQESLD
CNNGEEGLKRCNWITKSSDKLYVQFHDECWGVPVYDDNQLFELLSLCGMLMDYNWTEILK
RKTLFREAFAGFEPNVVAKMGENEIMEIASNKEIMLAESRVRSIVDNAKCILKIAKAHGS
FSGYMWSSVNYKPTINRCKHSRNVPLRTPKAEAISKDLLKHGFRLVGPVIVYSFMQAAGM
SIDHLVDCFRFSECVNLAERPWRHV
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaagaaaatgtgagaaggaatgtggtggagaaaaacaatagtagtccaaattta
aggagaactaaagagaaaccatcatcaactcaaagtctcttatcaaagcacttgaagaaa
gtttatcctgttgggatacacaaaacaagctcactgctttccctatcctcactttcttta
actctttcacataactcgagcgggtccttcacagactcttctacgacgctcgagcaaacc
atttcatctgcgctgcaactcattgcaccaacaccaactccagcaccggcccctagaagc
agagaggtacccattactaaaactagtgttcatagcccagttccacaagagagtttggat
tgtaacaacggtgaagaagggttgaaaagatgcaactggattacgaaaagcagtgataag
ctttatgtacaatttcatgacgagtgctggggagttccggtgtatgatgataaccaactg
tttgagctcctatcattgtgtggaatgttgatggattacaattggactgaaatattgaaa
aggaagactctttttagggaggcatttgctggatttgagccaaacgttgttgctaagatg
ggtgagaacgagatcatggaaatagcgtctaacaaggagataatgttagctgaaagtcga
gttagatccatagttgacaatgccaaatgcatcctcaaaattgctaaagcacatggatca
tttagtggatatatgtggagttcagtaaactataaaccaaccattaacagatgcaaacat
tcaagaaatgtacctctaagaacaccaaaagcagaagccattagcaaagatttattgaaa
catggctttcgacttgtcggtccagtgatcgtttattcattcatgcaagctgctggtatg
agcattgaccatcttgttgactgttttaggtttagtgaatgtgtcaatcttgctgaaaga
ccttggagacatgtctaa
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