Erigeron canadensis (horseweed): 122597571
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Entry
122597571 CDS
T07610
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122597571
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ecad03041
]
122597571
Spliceosome [BR:
ecad03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
122597571
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Motif
Other DBs
NCBI-GeneID:
122597571
NCBI-ProteinID:
XP_043626082
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Position
4:38924056..38924937
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AA seq
293 aa
AA seq
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MANKEGFNHNNLDIVFKLHKTQRYIDIMNKVEDDLDPIYTYTSIMKELEDFDHVLINRKK
SSETGSVLKDDSKYHQMVLECNTLLGDIEKEIGNVHNFIRDECRLKFPELESQVHDPFLY
ARAVKYTGNHVYFPSIKRRLPEEVFQKVFQACDLVLTLDTSKNKLLEYVTRRMVYVAPNL
CGVVGREVAAKLMVAAGSLESLADMPASDVQLLGTENNISLLSSHYSNKFGVAYIEETDV
FKTARRDMKMLVSRHLAEKSVIAARIDSARDDPSGSYGRTCLQEFRNKNIDLF
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaaagaaggcttcaatcacaataatctggacattgttttcaagttacacaaa
acacaacgatacatagatattatgaacaaagtcgaggatgaccttgacccaatatataca
tatacttctattatgaaagaacttgaggatttcgatcatgttctaattaacagaaaaaaa
tcatcagagacagggtcggttttgaaagatgattcaaagtaccaccaaatggttctcgaa
tgtaacacattgttaggcgacatagaaaaagagataggcaatgtccataatttcattcgt
gatgaatgccgcctcaagtttcctgaactcgagtcacaagtccatgacccgttcctttat
gcacgagcggtcaagtatacagggaatcatgtatactttccttccattaaacgtcgtctc
cctgaggaagtttttcaaaaggtctttcaagcgtgtgatttggtgcttacattggacaca
tccaaaaataaacttttagaatatgtgacacgaagaatggtgtatgttgcaccgaacctt
tgtggtgttgttgggagagaagtagcggcaaaacttatggtcgcggctggaagtcttgag
tcattagctgatatgccggctagtgatgttcagcttctaggtaccgaaaataacataagc
ttgttatctagtcattattctaataagttcggtgttgcttacattgaagaaacagatgtt
tttaagacggcacgtcgtgatatgaagatgcttgttagtcggcatttggctgaaaaatca
gttattgcggcacgaatagactctgctagagatgatccatccggaagttatggaagaaca
tgcctgcaagaatttcgaaacaagaatattgatctcttttag
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