Erigeron canadensis (horseweed): 122597715
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Entry
122597715 CDS
T07610
Name
(RefSeq) ABC transporter B family member 21-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122597715
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecad02000
]
122597715
04147 Exosome [BR:
ecad04147
]
122597715
04090 CD molecules [BR:
ecad04090
]
122597715
Enzymes [BR:
ecad01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
122597715
Transporters [BR:
ecad02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
122597715
Exosome [BR:
ecad04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122597715
CD molecules [BR:
ecad04090
]
Proteins
122597715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_16
AAA_22
ABC_ATPase
RsgA_GTPase
AAA_5
AAA_21
AAA_15
AAA_30
Zeta_toxin
AAA_25
APS_kinase
DUF87
DUF815
nSTAND1
DEAD
Motif
Other DBs
NCBI-GeneID:
122597715
NCBI-ProteinID:
XP_043626218
LinkDB
All DBs
Position
1:complement(45312919..45321023)
Genome browser
AA seq
1276 aa
AA seq
DB search
MDVENISIQEMEPKEVIASESPLSGQAATGAPEMLERKKEATDAVPYHKLFTFADTVDYF
LMLIGTINAIGNGISMPIQAVIFGELIDTFGETTDNNDIVHQISKVSLKFVYLALGTGAA
SFLQMVCWMVTGERQAARIRSLYLKTILRQDVGFFDLESKTGEIVERMSGDTVIIQDAMG
EKVGKFIQLVSAFFGGFVIAFSKGWLLSLVLLSAIPPIVISAAFMTVVITKLMSRGQNAY
SAGAAVVEQTISSIRTVASFTGEKKTVAKYDESLKKAYTAGVQEGLVAGLGSGMFMFCVL
SCYALAIWFGGKMILEKGYTGGKVISIMVVLMISSFSLGQASQCLSAFTSGKVAAFKLFQ
VINRKSEIDPYDTSGQILDDIRGDIELRDITFSYPTRPDENIFSGLSLVIPYGTTTALVG
HSGSGKSTIISLIERFYDPQEGEVVIDGINIKDYQLRWLRGKISLVSQEPVLFSSTIKDN
IAYGKDDATLDEINAAAELANAAKFIDKFPQGLDTMVGDHGTHISGGQKQRIAIARAILK
DPRILLLDEATSALDAESERVVQEALDRIMVNRTTVIVAHRLSTIINSDVIAVIHDGKIV
EKGSHSKLLQDPEGTYYQLVRLQELSKYSENQESSNEEITVALRRHSSQRLSILSLEQPN
THNSSPHSFSFSNSDEPIPDNDKKPESFKPSNVSLVRLAYMNKPEILVIILGSIAAVING
VIFPMFGYLLSTIIKSFYKPPHELRKDSAFWALMLALLGLGGLIATPLRTYFFSIAGCKL
IWRIRLKCFEKIVQMEISWFDKAENSSGIIGAKLSADAASVRGLVGDNLSVIVQNTATII
SGLLIAFIGNWQLSFIVLLLLPLLAINGYLQMKFLSGFSADAKKLYEDASQVASDAVGSI
RTVASFSAEDKVMKLYETKCEGPKRVGIKQGLISGAGFGSSLLLLYLVYAAIFYIGALLV
EAGKTTFPEVFQVFLGLSMVAMGVSQSGSSVPDSGKAKTAAASVFALLDQQSTINYTDES
GTILENVKGDIKFSHVSFKYPSRPDIQIFKDLCLDIHSGQTVALVGESGSGKSTVVSLLQ
RFYDADSGQITLDGVVIQKLKLKWLRQQMGLVSQEPVLFNDTIRANISYGKEGNATEAEV
LESAELANAHKFISSLHKGYDTIVGERGIQMSGGQKQRIAIARAMVKAPKILLLDEATSA
LDVESEKVVQDALDQVMVHRTTVVVAHRLSTIQGADVIAVIKNGVIAEIGKHEKLVSIKD
GIYASLVALHTSSSSS
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggaaaatatttccattcaagaaatggaaccaaaagaagtcattgcatcagaa
agtcctttgtcaggccaagcggcaacaggagctccagaaatgcttgaaaggaagaaggaa
gcaactgatgcagtcccatatcacaagctttttacctttgctgacaccgttgactatttt
cttatgttaatcggaacaattaatgctattggaaatgggatcagcatgcctattcaggca
gtgatattcggggaactaattgatacttttggagagactacagataacaatgacattgtt
catcaaatttccaaggtatccctcaagtttgtctacttggctctgggaactggtgcggcg
tcatttttacagatggtgtgctggatggtgactggagaacgacaggcggcacgaatcaga
agcttatacttaaaaacaatattgagacaagatgttggattttttgatctggaaagcaaa
actggagaaattgtggaacgtatgtctggtgatactgttattattcaggatgctatggga
gaaaaggttgggaaattcattcaactggtttcagcattttttggaggcttcgtgatagct
ttttcgaaggggtggcttctttccctagtgttgttatctgcaattcctcctatcgtgatc
tcagctgcctttatgactgttgttattacaaagctaatgtccagaggtcaaaatgcttat
tctgctggagcagctgtagttgaacagacaattagctctataagaaccgttgcatcattc
acaggtgaaaaaaaaactgtcgccaagtatgacgagtcccttaagaaagcttacacggct
ggggtgcaagagggtctggttgctggacttggttctggaatgtttatgttttgtgtactt
tcttgctacgctttggccatttggtttggtggcaaaatgattctggaaaagggatatact
ggaggaaaagtgataagtataatggtcgtacttatgataagctccttttccttagggcag
gcttcgcaatgcttaagtgcatttacctccgggaaagttgcagcttttaaactgttccag
gtgataaacagaaagtcggaaatagacccttatgacacgagtggtcagatactggacgat
attcgtggggatattgaattacgggacattaccttcagctatccaactagaccagatgag
aacatctttagcgggctttctcttgtcataccatatggcacaaccacagctttagttgga
catagtggaagtgggaaatcaacaataatcagcctcattgagaggttttacgaccctcaa
gaaggcgaggttgttattgatggcatcaatattaaagactaccaactgaggtggcttaga
ggcaagatcagtcttgtcagccaggaacctgtattgttcagttccactattaaagataat
attgcttacgggaaggacgatgcaacacttgatgaaatcaacgcagctgcggagctcgcc
aatgctgccaaatttattgacaagttcccccaggggctagatacaatggttggtgatcat
ggcactcatatatctggaggacagaagcagagaatagcaatagccagggcaatcttaaag
gacccaagaattttactactggatgaagctacaagtgctcttgatgcagaatcagagagg
gtagtccaagaggcacttgatagaattatggttaacagaactaccgttattgtagcccat
cgcctgagcacaatcataaactctgatgtaatagcagttattcacgatggcaagattgta
gagaaaggttcacactctaaactattacaagatcctgaaggtacatattaccagcttgta
agattacaagagctcagcaaatactcagaaaaccaagaaagcagcaatgaggagatcact
gtcgctctaagaagacattcaagtcagcgtttatctatcttaagtctagaacaaccaaat
acccataacagtagtccacattcattttctttcagtaactctgatgaaccaatacctgat
aatgataaaaaaccagaatccttcaagccttcaaatgtctcacttgtccgcttggcatat
atgaacaagccagaaattctggtgataatactaggctcgatagctgctgtaatcaatggt
gttatctttcctatgtttgggtatcttctttcaactattataaagtctttttataagcca
cctcatgaactgcgcaaggattcggcattttgggctttgatgcttgctctacttggtttg
ggaggtttgatagccacaccattgaggacctacttctttagtatagctgggtgtaagctt
atatggagaatccgactaaagtgctttgagaaaatagttcagatggagataagctggttt
gacaaggcagaaaattcaagtggcatcattggagccaaactgtcggcagatgcagcatct
gtaagaggtttggttggggataatctttccgtaattgttcagaacacagcaacaataatc
agtggtttactcatcgcatttatcggaaactggcagttgtcttttatagttttactattg
ctaccactactggctattaatggataccttcagatgaaattcctcagtggattcagtgct
gatgcaaagaaattgtatgaggatgcaagtcaggttgctagtgatgcagttggaagcata
agaactgttgcttcattttctgcggaagataaggtgatgaagctatatgaaacaaaatgt
gaaggaccgaaaagagtaggaatcaaacaaggtctaattagtggtgctggttttgggtca
tccttgttgttgttatatttagtatatgcagctatcttttatattggtgctcttttagtt
gaagctggtaagactacattccctgaagttttccaggtgtttttggggttgagtatggta
gccatgggtgtttcacaatcaggatcctctgttccggactctggaaaagccaagactgct
gcagcttcagtttttgctcttcttgaccagcagtcaactataaactatactgatgagtct
ggaacaatactagaaaatgtgaagggtgatatcaagtttagtcatgttagctttaagtat
ccttctagacctgacattcaaatcttcaaggacctttgtttggatattcattctggccag
acggtagctcttgttggagaaagtggaagtggaaaatctactgtggtttctttgctgcaa
aggttctatgatgctgattcgggccagataacacttgatggagttgtgatccaaaagtta
aagttgaagtggttaaggcagcagatgggtctagtgagtcaagagccggtcttgtttaat
gatacaattcgtgccaacatttcatatgggaaggaaggcaatgctactgaggcagaagtt
ttagaatcagcagaattggcaaatgcccataagttcatcagtagcttacacaaggggtat
gatacaattgtaggtgaaagaggaatccagatgtcgggagggcaaaaacaaagaattgca
atagcaagagcaatggtaaaggctccaaagatattgctactagatgaggcgactagtgcc
cttgacgttgaatctgagaaagtggtacaagatgcacttgatcaggttatggtacacaga
accacagtggtggtagctcacaggctatccacaatccagggagcagatgttattgctgtc
ataaaaaatggagtcattgcagagatagggaaacatgagaaactcgtcagtatcaaagat
ggcatttatgcttctttagttgcattacatactagttcatcttcttcataa
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integrated database retrieval system
