KEGG   Erigeron canadensis (horseweed): 122597727
Entry
122597727         CDS       T07610                                 
Name
(RefSeq) ras-related protein Rab7-like
  KO
K07897  Ras-related protein Rab-7A
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad04144  Endocytosis
ecad04145  Phagosome
ecad04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    122597727
   04145 Phagosome
    122597727
   04148 Efferocytosis
    122597727
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ecad04131]
    122597727
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ecad04147]
    122597727
   04031 GTP-binding proteins [BR:ecad04031]
    122597727
Membrane trafficking [BR:ecad04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    122597727
Exosome [BR:ecad04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   122597727
  Exosomal proteins of other body fluids (saliva and urine)
   122597727
  Exosomal proteins of colorectal cancer cells
   122597727
  Exosomal proteins of bladder cancer cells
   122597727
GTP-binding proteins [BR:ecad04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    122597727
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA ATP_bind_1 RsgA_GTPase AAA_16 Septin nSTAND3 AAA_7 NTPase_1 AAA_22 ATPase_2 AAA_24 PduV-EutP AAA_5 NACHT MCM cobW NB-ARC ATP-synt_ab TniB SRPRB
Other DBs
NCBI-GeneID: 122597727
NCBI-ProteinID: XP_043626227
LinkDB
Position
4:complement(43584214..43586527)
AA seq 207 aa
MSSRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGAAFLTKEVQFEDRLFTMQ
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFESLSNWRDEFLIQASPSDPENFPF
VVLGNKVDVDGGNGRVVSRKKAKAWCASKGNIPYFETSAKEGTNVEAAFQCIATNALKNE
PNEETYFPETIDVGGDGRQHRSYGCEC
NT seq 624 nt   +upstreamnt  +downstreamnt
atgtcgtctcgaaggagaatgcttcttaaagtcatcatcctcggcgacagcggggttggc
aagacatctctgatgaaccagtatgtgaatcgtaagtttagcaatcagtataaggcaaca
attggagctgctttcttaacaaaagaagttcagtttgaagataggttgttcacaatgcag
atatgggatactgctggacaagagaggtttcaaagccttggagtagccttctacagggga
gctgactgttgtgttcttgtatacgatgtgaacgtcatgaaatcatttgagagtctcagc
aactggcgtgatgaattcttgattcaggcaagtccatccgatccagagaacttcccattt
gtcgtattggggaacaaagtagatgttgatggcggcaatggtcgagtggtctctagaaag
aaagcaaaggcatggtgtgcctctaagggaaacataccttactttgagacttctgcaaaa
gaaggaaccaatgtagaagctgccttccagtgtatagccacaaatgctctcaagaacgaa
cccaacgaagaaacgtacttccctgagacgatcgatgttggtggtgatggacgtcagcac
aggtcttacggatgtgaatgctga

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