Erigeron canadensis (horseweed): 122597768
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Entry
122597768 CDS
T07610
Name
(RefSeq) p21-activated protein kinase-interacting protein 1-like
KO
K14830
protein MAK11
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ecad03009
]
122597768
Ribosome biogenesis [BR:
ecad03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
122597768
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WDR55
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_RSE1_2nd
Beta-prop_EIPR1
PQQ_2
Phage_stabilise
Motif
Other DBs
NCBI-GeneID:
122597768
NCBI-ProteinID:
XP_043626272
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All DBs
Position
4:complement(27450710..27456545)
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AA seq
337 aa
AA seq
DB search
MSIVAGSYERFIWGFKLKTLKHSTESLTLSPLFTFPSHTSPIKSVAVSGTVAVSGGSDDT
IKIYDLTTSTEIGSLTDPTSTVTTLCLYTPQTSPAFPRNLFSGFDDGNVSFYDADPFVLL
KSVKVHKKGVNDLCVHPSGKLALTVGRDSCLGMVNLVRGRRSFFCRMEKEGNLVEYDCIG
GEKFFMGMDEKVSVHESENAKLIVELPTKKKVLCIAPGMNGLLYTGGEDRNLTAWDTDSG
KVAYSIEDAHSARLKGIVVLSKIEGTDEGEPFLVASASSDGIIRVWDVRMATKDKPTPLA
EVNTKSRLTCLAGSSVKSLKKRFGGSGNSSKEQDEAA
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgagcatagtagcaggatcatacgaacgtttcatctggggtttcaagctcaaaacttta
aaacattcaacagaatccttaaccctatctcccctcttcactttcccatcacacacttcc
ccaatcaaatccgtcgccgtttccggcaccgtcgccgtctccggcggttcagacgacaca
atcaaaatctacgacctcacaacctcaacagaaatcggttctttaactgacccaacatca
actgtcaccactctttgtctttacaccccacaaacctcccctgcattccctcgtaacctg
ttttcgggtttcgatgatgggaacgtgtcgttttacgatgccgacccgtttgtgttgttg
aaaagtgtaaaggttcataagaaaggggtgaatgatttgtgtgtgcatccaagtgggaaa
cttgcgttgaccgttggaagggattcgtgtttgggaatggtgaatttggttagagggaga
aggagttttttttgtaggatggaaaaagaagggaatttagttgagtatgattgtattggg
ggtgaaaagttttttatgggtatggatgaaaaggtttcggttcatgaatccgaaaatgcc
aaattgatcgttgagttgccgaccaaaaagaaagttctttgtattgctcctggcatgaat
ggacttctttacaccggtggagaggataggaatctcacagcatgggatacagacagcggg
aaggttgcatattccattgaggatgcacattcagctcgtttaaaaggaatagtagtgctt
tctaagattgagggtacagatgaaggtgaaccatttttagtggcatctgcttcttcagat
ggtattatacgtgtttgggatgttcgcatggccaccaaggataaaccaacaccactagct
gaagtcaataccaagtctaggctcacttgtcttgctgggtcttctgttaaatctttaaag
aagcgttttggtggctccggtaattcaagtaaagagcaggatgaagctgcttaa
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