Erigeron canadensis (horseweed): 122597792
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Entry
122597792 CDS
T07610
Name
(RefSeq) E3 SUMO-protein ligase MMS21
KO
K22756
E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122597792
03400 DNA repair and recombination proteins [BR:
ecad03400
]
122597792
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
122597792
DNA repair and recombination proteins [BR:
ecad03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
122597792
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-Nse
zf-RING_UBOX
BID
zf-C3HC4_2
zf-MIZ
zf-C3HC4
zf-RING_2
DUF3492
Rtf2
Motif
Other DBs
NCBI-GeneID:
122597792
NCBI-ProteinID:
XP_043626296
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Position
4:complement(37265812..37269111)
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AA seq
251 aa
AA seq
DB search
MASTSAPQVSSRMKNAASTLCDDNQTLLADIRRAISSMKEIGISLEKQHKTQLVKELENE
YMELLQSYEDCANLSVAIENVGNTYQPAEQPTDFKKLIDNEMAKAKRRSTSAPQVNQLLR
LFREAIWNVHNSGQPMPGEEQEDIIVTSTQNILLNFTCPLSGKPVTELSEPVRSMDCKHI
YERKAIMQYISSKYSNRCPVAGCPKTMIAARVVCDPLLLIEIEESRAMNKDTIPPNIIED
FTEDTDEENSE
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgacttcagctccgcaagtatcatctagaatgaaaaacgccgcttcaacactt
tgcgacgataatcaaacactccttgctgatattcgaagggctataagtagtatgaaggaa
attgggattagtcttgagaaacaacacaaaacccaattggtgaaggaacttgaaaatgag
tatatggagttactgcaatcttatgaggattgtgctaatctttccgttgcaattgaaaat
gttgggaatacgtatcagcccgctgaacagccgactgattttaagaaactgatagacaat
gagatggcaaaggcaaaacgccgttcgacttctgccccacaagttaatcagttgttacgc
ctctttagagaagctatctggaatgtgcataattctggacaacctatgcccggtgaagaa
caggaagatatcatagtcactagtacacaaaatatccttttaaattttacctgtccgtta
agtggaaaacctgttactgaactctcagaacctgtacgcagtatggactgcaagcatata
tatgagaggaaggctatcatgcagtacatcagttccaagtatagcaatagatgtccagtg
gcaggatgtcctaaaaccatgattgcagcaagagttgtatgtgacccattgttactcatc
gaaattgaagaatcacgtgcaatgaataaggacacaatcccgcctaacatcatagaggat
ttcactgaggatactgacgaagaaaattctgagtga
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