Erigeron canadensis (horseweed): 122597800
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Entry
122597800 CDS
T07610
Name
(RefSeq) probable E3 ubiquitin-protein ligase ZFP1
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122597800
Enzymes [BR:
ecad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122597800
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122597800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-C3HC4_3
zf-RING_11
zf-RING_UBOX
zf-ANAPC11
zf-RING_16
Prok-RING_4
PHD
Motif
Other DBs
NCBI-GeneID:
122597800
NCBI-ProteinID:
XP_043626310
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All DBs
Position
4:complement(37194798..37200532)
Genome browser
AA seq
510 aa
AA seq
DB search
MGQRNMLYMGPMLETEHGHLQPEPCIVPYGGISSFPQPTSNPTILPPPGTRTSFNPQHLP
ENHGPLSHEIAQYNGLDHHHHGNNVFMTPPGARVFPVAVNHGMQDQLPFSSVRGSFENGQ
FLDGFKRKNAEGFLGNIQYFYPAPGSSSSVAIPMNTEVTMMDGPSLVMEPAVHRSARNRG
SSAIGVDPVLAHSSSHLMPGNYGGQHLQAVPNPWLDQQFCGNSSDTGSFSWNHGPGIPYL
QGPINGGGMEAANAGLHGYQVAPSNRNPTAFVHPSTITPHQGPHSLHHPPPPPMPTMQGH
NMDFHSQLASTSRRLPSNSTINPFQSGIDTGPRFAGPTPPTGLRVFRPHRRDMVVEATAR
HRGFPHLRVLPEDGVAILDISGYHEVGHSVDHHRDMRLDIDHMSYEELLALGEQIGSVGS
GLSDDFILEHLKSRVFTSSKSSSEPEDASSTDLELNSCVICQTNYDDQEQIGVLDCGHEY
HAECVKKWLVVKNTCPICKSTGLAAQAKES
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggggcaacgaaatatgttgtatatgggtccaatgcttgaaacagaacatggtcatctc
caacccgaaccatgtatagtaccttatggtggtatatcgagttttccgcagcctactagt
aatccaaccatattaccacctcctggaacccgaacttctttcaatcctcaacacctgcct
gaaaatcatggacctctgtcacatgaaatcgctcaatacaatggtcttgatcatcatcat
catggtaacaatgtgtttatgactcctcctggtgctcgtgtatttcctgttgcagttaat
cacgggatgcaagatcagttaccattttctagcgttcgtggaagctttgaaaatggacag
tttttggatggatttaaacgaaagaatgctgaaggattcttaggaaacattcagtatttc
tatccggcacctggctcgagttcttcagttgccatccccatgaacacagaggtaacaatg
atggatggcccatcattagtcatggaacctgcagtccatagaagtgcgagaaacagaggt
tcaagtgctattggcgttgacccagttttggctcatagtagtagccatttgatgcctgga
aactatggtggtcagcaccttcaagcagtacctaacccatggctggatcagcagttttgt
ggtaatagtagtgataccggttccttttcatggaatcatggtcccggaataccttatctc
caaggacctatcaacggaggtggtatggaggctgcaaacgctgggttacatgggtaccaa
gtcgcacccagcaatagaaaccccacggcctttgttcacccgtctactatcacgcctcat
caggggccccacagtcttcaccacccaccaccgccaccaatgcctacaatgcaaggccac
aacatggactttcattctcaattggcatctacttcacgcagacttccatcaaacagcaca
ataaatccttttcaaagtgggatagatacagggcctagatttgcgggtcccacgccgcca
actggtctaagagtttttcggcctcatcgacgggacatggtggttgaggcaactgcacgg
catcggggctttccccacttgagagttctcccggaagatggggttgcaatccttgatata
tctggttatcatgaagtaggacattccgttgaccatcatagagacatgcgtttggacata
gatcacatgtcttatgaggagcttcttgcacttggcgaacagatcggcagtgtgggctca
ggcttgtcagatgattttattctagaacatctaaaatcacgagtatttacttcatccaaa
tcttcttctgagcctgaagatgcatcttccactgatttagaacttaattcttgtgtaatt
tgtcagacaaattatgacgatcaagaacagattggggtgctagattgtgggcatgagtat
catgctgaatgtgttaagaagtggttggtcgttaagaacacctgtccaatttgcaaatcc
acgggacttgctgcacaagcgaaggagtcataa
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