Erigeron canadensis (horseweed): 122598043
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Entry
122598043 CDS
T07610
Name
(RefSeq) dual-specificity RNA methyltransferase RlmN
KO
K06941
23S rRNA (adenine2503-C2)-methyltransferase [EC:
2.1.1.192
]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ecad03009
]
122598043
Enzymes [BR:
ecad01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.192 23S rRNA (adenine2503-C2)-methyltransferase
122598043
Ribosome biogenesis [BR:
ecad03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
122598043
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Radical_SAM_2
Fer4_12
Motif
Other DBs
NCBI-GeneID:
122598043
NCBI-ProteinID:
XP_043626584
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All DBs
Position
4:2673969..2680830
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AA seq
462 aa
AA seq
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MVVESTIWMRRLMIATATTTTTTTSTTVFRRTTNATASPSYSVSKPSPPPLLSPIFHHRR
RSFSTSPASQTLHNQSFSSLGVEDGGINSKDSQKVILKGMRYQEFQNWVTSQGYRPAQAL
MLWKLLYGNNSKSIWAHSCEELEGLNKDLTMMLSKCAKLKALQVKDIITASDGTRKILFR
LDDGLVIETVIIPNNDRGRNTVCVSSQVGCAMNCQFCFTGRMGLRRNLTAAEIVEQAVFA
RRLFTDEVGPITNVVFMGMGEPLQNIDNVLKAADVMVDEQGLHFSPNKVTISTSGLVPQI
KRFLRESKCALAVSLNATTDEVRNWIMPINRKYNLNVLLETLREELHLKHKYKVLFEYVM
LAGVNDSIDDAKRIIDLVKGIPCKINLITFNPHSGSYFQPTTDAKMVEFRNILAEGGCVV
LMRPSRGDDQMAACGQLGNPGEFQAPLLKVPPRFQASLEPSI
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggttgtggaatcaacaatctggatgaggcgactaatgatagccaccgccaccaccacc
accaccacaacctctaccactgtcttccgccgcaccaccaacgccaccgcctctccgtca
tactctgtttccaaaccatcaccgccgccacttctttctccgatatttcaccaccgccgc
cgttcattttcaacatcccctgcttcacaaaccttgcacaatcaatctttttcttcttta
ggagttgaagatggtggaattaattctaaggactctcaaaaagtcattctcaaaggaatg
agataccaagaattccaaaattgggtcacttcccaaggttatagacctgctcaagcttta
atgttgtggaagttgctatatgggaataattcaaagagtatttgggcacattcatgtgaa
gaattggaaggtttaaacaaagatctaacgatgatgttgagtaaatgtgctaaactgaag
gcattacaagtgaaagatattattacggcatccgatggcactagaaagattctgtttaga
ttggatgatggattggtaatagagacggtcataatacccaacaatgacagaggaaggaat
acggtgtgtgtttcaagccaagtgggatgtgcaatgaactgccagttctgcttcactggc
aggatgggtttgaggagaaatctaactgcagcggaaatagtagaacaagcggtttttgca
cgacgattgtttacggatgaagttggacccataacaaatgttgttttcatggggatggga
gaaccacttcagaacatcgacaatgtgttaaaagccgcagatgtaatggtggatgagcaa
gggcttcatttcagccccaacaaggttaccatttcaaccagtgggctagtgccccagata
aaacgctttcttcgtgagtctaaatgtgctttagccgttagtctgaatgctacaactgat
gaagttaggaactggattatgcccattaatcggaagtataatttgaatgtacttcttgaa
accctccgtgaagaactccacttgaagcataaatacaaagtcttatttgaatatgtgatg
cttgctggagttaatgacagtattgatgatgcaaaaaggattattgatcttgttaagggc
attccttgtaagattaacctcatcacattcaacccgcatagtgggtcatacttccaaccc
acaacggatgcaaagatggtcgagtttcgaaacatcctggcagagggaggttgtgttgtg
ttaatgagaccaagtagaggagatgaccaaatggctgcatgtggtcaattgggaaacccg
ggtgagtttcaagctcctttgcttaaagtgccgccaagatttcaagcctcgttggagcca
tctatataa
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