Erigeron canadensis (horseweed): 122598078
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Entry
122598078 CDS
T07610
Name
(RefSeq) zinc finger protein MAGPIE-like
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecad03000
]
122598078
Transcription factors [BR:
ecad03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
122598078
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_STOP2_C
zf-C2H2_4
DUF4300
zf-C2H2_6
zf-met
Motif
Other DBs
NCBI-GeneID:
122598078
NCBI-ProteinID:
XP_043626624
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All DBs
Position
4:7308965..7315215
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AA seq
479 aa
AA seq
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MLEKLVTEDIIQNGFTTHVNNLLPPSSNPPTIKRKRNLPGTPDPEAEVIALSPKTLMATN
RFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKSCVHNHPSRALG
DLTGIKKHFCRKHGEKKWKCAKCSKCYAVQSDWKAHSKTCGTREYKCDCGTIFSRRDSFI
THRAFCDALAEETARVSAASHHFNNNVTQPAGSLINYHFVGPQVLSGQTMMAQHSEIFKP
IPTNNQLLAHENHNLEDGLSLLNNNNNDNNDLREMPHQINLFVDPNQNHQPNWFEFGSVR
NNNLDHQENINLSAPPPSLFTIQNHLNQSSAASMSATALLQKAAQIGSTTSTSSATTRNN
QLLLGSNFGLKSNNNDNGIVQVQEQDKFCGLYGTTTTRMTDTGIEVEFGNDFTSLDKMCP
PSKRRHIQIEDHNNSLINITNISNTNNNNNNNNNTGHTRDFLGVGIQPMCHPSMRFDNL
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgttagagaagcttgtaacagaagacataatccaaaatggtttcactactcatgtcaac
aatcttctaccaccttcttccaatcctcctacaatcaagagaaaacgaaatcttcctggc
actccagatcctgaagcagaagtaatcgcgttatctccaaagacactaatggcaacaaac
agattcttgtgtgagatttgtggcaagggatttcaaagagatcaaaatcttcaacttcat
agacgaggtcacaacttgccatggaagctaaaacaaagaacaagcaaagaagtgagaaag
cgggtttatgtatgccccgaaaagtcttgtgtccataatcatccatcaagggctcttgga
gacttgactggtattaagaagcatttttgtaggaaacatggtgagaagaaatggaaatgt
gcaaagtgttccaagtgttatgcggttcagtcggattggaaagctcattccaaaacgtgt
gggactagagaatacaagtgcgattgcgggacaatattttccaggagagatagctttata
actcatagagccttctgtgacgccttggcagaggaaactgcaagagtttccgccgcatct
catcatttcaacaataacgtcacacaaccagccggaagcctaataaactaccactttgta
ggaccacaggttctttctggtcaaaccatgatggctcaacattccgaaatcttcaaacca
atcccaaccaacaaccagctactagctcatgaaaaccataatctcgaagatgggctttca
cttttgaataacaacaacaacgacaataatgatcttcgtgaaatgccacatcagattaat
ttattcgttgatcctaaccaaaaccatcaaccgaattggttcgagtttggatcagtcagg
aacaataatttagatcatcaagagaatattaacttaagtgcaccaccaccttctttgttc
accattcaaaaccacttgaaccaaagtagtgctgctagcatgtctgcaaccgctttgttg
caaaaagccgcacaaattggctcaacgacttctacttcatcagctaccacaagaaataac
caattattactaggatcaaactttggattgaagtccaataataatgataacggcattgtt
caagttcaagagcaagacaaattttgcgggttatatggtactacaacaactcgaatgaca
gatactggaatcgaagtggaatttgggaatgattttacaagtcttgacaagatgtgccct
ccttcaaaaagaagacatatacaaattgaagatcataataatagtcttattaatatcact
aatatttctaatactaacaataataataataataataataatacaggacatactagggat
tttcttggtgtgggaattcagcccatgtgccatcctagtatgagattcgacaatttgtaa
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