KEGG   Erigeron canadensis (horseweed): 122598078
Entry
122598078         CDS       T07610                                 
Name
(RefSeq) zinc finger protein MAGPIE-like
  KO
K25870  zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
ecad  Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ecad03000]
    122598078
Transcription factors [BR:ecad03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    122598078
SSDB
Motif
Pfam: C2CH-4th_BIRD-IDD C2H2-2nd_BIRD-IDD C2CH-3rd_BIRD-IDD zf-C2H2 zf-C2H2_STOP2_C zf-C2H2_4 DUF4300 zf-C2H2_6 zf-met
Other DBs
NCBI-GeneID: 122598078
NCBI-ProteinID: XP_043626624
LinkDB
Position
4:7308965..7315215
AA seq 479 aa
MLEKLVTEDIIQNGFTTHVNNLLPPSSNPPTIKRKRNLPGTPDPEAEVIALSPKTLMATN
RFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKSCVHNHPSRALG
DLTGIKKHFCRKHGEKKWKCAKCSKCYAVQSDWKAHSKTCGTREYKCDCGTIFSRRDSFI
THRAFCDALAEETARVSAASHHFNNNVTQPAGSLINYHFVGPQVLSGQTMMAQHSEIFKP
IPTNNQLLAHENHNLEDGLSLLNNNNNDNNDLREMPHQINLFVDPNQNHQPNWFEFGSVR
NNNLDHQENINLSAPPPSLFTIQNHLNQSSAASMSATALLQKAAQIGSTTSTSSATTRNN
QLLLGSNFGLKSNNNDNGIVQVQEQDKFCGLYGTTTTRMTDTGIEVEFGNDFTSLDKMCP
PSKRRHIQIEDHNNSLINITNISNTNNNNNNNNNTGHTRDFLGVGIQPMCHPSMRFDNL
NT seq 1440 nt   +upstreamnt  +downstreamnt
atgttagagaagcttgtaacagaagacataatccaaaatggtttcactactcatgtcaac
aatcttctaccaccttcttccaatcctcctacaatcaagagaaaacgaaatcttcctggc
actccagatcctgaagcagaagtaatcgcgttatctccaaagacactaatggcaacaaac
agattcttgtgtgagatttgtggcaagggatttcaaagagatcaaaatcttcaacttcat
agacgaggtcacaacttgccatggaagctaaaacaaagaacaagcaaagaagtgagaaag
cgggtttatgtatgccccgaaaagtcttgtgtccataatcatccatcaagggctcttgga
gacttgactggtattaagaagcatttttgtaggaaacatggtgagaagaaatggaaatgt
gcaaagtgttccaagtgttatgcggttcagtcggattggaaagctcattccaaaacgtgt
gggactagagaatacaagtgcgattgcgggacaatattttccaggagagatagctttata
actcatagagccttctgtgacgccttggcagaggaaactgcaagagtttccgccgcatct
catcatttcaacaataacgtcacacaaccagccggaagcctaataaactaccactttgta
ggaccacaggttctttctggtcaaaccatgatggctcaacattccgaaatcttcaaacca
atcccaaccaacaaccagctactagctcatgaaaaccataatctcgaagatgggctttca
cttttgaataacaacaacaacgacaataatgatcttcgtgaaatgccacatcagattaat
ttattcgttgatcctaaccaaaaccatcaaccgaattggttcgagtttggatcagtcagg
aacaataatttagatcatcaagagaatattaacttaagtgcaccaccaccttctttgttc
accattcaaaaccacttgaaccaaagtagtgctgctagcatgtctgcaaccgctttgttg
caaaaagccgcacaaattggctcaacgacttctacttcatcagctaccacaagaaataac
caattattactaggatcaaactttggattgaagtccaataataatgataacggcattgtt
caagttcaagagcaagacaaattttgcgggttatatggtactacaacaactcgaatgaca
gatactggaatcgaagtggaatttgggaatgattttacaagtcttgacaagatgtgccct
ccttcaaaaagaagacatatacaaattgaagatcataataatagtcttattaatatcact
aatatttctaatactaacaataataataataataataataatacaggacatactagggat
tttcttggtgtgggaattcagcccatgtgccatcctagtatgagattcgacaatttgtaa

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