Erigeron canadensis (horseweed): 122598081
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Entry
122598081 CDS
T07610
Name
(RefSeq) E3 ubiquitin-protein ligase UPL3
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122598081
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122598081
Enzymes [BR:
ecad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
122598081
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
HECT type E3
122598081
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
ARM_ARMC5
Arm
HEAT_EZ
PSP
Motif
Other DBs
NCBI-GeneID:
122598081
NCBI-ProteinID:
XP_043626626
LinkDB
All DBs
Position
4:5844250..5857744
Genome browser
AA seq
1864 aa
AA seq
DB search
METRSRKRAEASSSAAQSTRSAKRTRFSTSNAPVLSTSSTTTATTRSRAASFNMDNNLNS
VIESSGSGSGRGRRSRKNNSTSNNQNLENPDNKGKEKEHEVRDRDDNNNLGLNIDGDHSH
HHHHDDDDDDDDDDSEGGNVGILHQNLTSASSALQGLLRKLGAGLDDLLPSSAMGSASSS
HQSGRLKKILSGLRADGEEGKQVEALTQLCDMLSIGTEDSLSTFSVDSFVPVLVGLLNHE
SNPDIMLLAARGITHLCDVLPSSCAAVVHYGAVSCFVARLLTIEYMDLAEQSLQALKKIS
QEHPTACLRAGALMAVLSYLDFFSTGVQRVALSTAANMCKKLPSDAADFVMEAVPLLTNL
LQYHDAKVLEHASVCLTRIAEAFAASPDQLDELCVHGLVKQAATLISTSSSGGGQASLST
STYTGLIRLLSTCASGSPLGSKTLLHLGISGILKDILSGSGLVATMSVSPALSRPPEQIF
EIVNLANELLPPLPNGTITLPTSNVFVKGSLLKKSPTGSSSKQEESSGGAPDVSAREKLL
TDQPELLQQFGMDLLPVLIQIYGSSVNAPVRHKCLSVIGKLMYFSTADMIQSLLGVANIS
SFLAGVLAWKDPQVLVPSLQIAEILMEKLPETFSKMFVREGVVHAIDTLSVSSSGNALSP
PLSSEKVNDSIPGSSTRSRRYRHRIGTSSTDVNAAEDFKNTGPPANSVELPAVSSSLRTA
VSTSAKAFKDKYFPSDPGAPEVGVTDDLLHLKNLCKKLGSAVDDQKMKSKGKSKVSGPRF
TDFSPGKEESLLGVITEMLSELTKDDGVSTFEFIGSGVVAALLNYFSCGHFSKEKVSEAN
MPKLRQLAIKRYTSFIEVALPLSVNEGKQAPMSILVQKLQYALTSLERFPVVLSHSARSS
TGNARLSSGLGALSQPFKLRLCRAHGEKTLRDYSSNVVLIDPLASLAAVEDFLWPRVQRS
ESSQKPSGYVGNLESGTTPAGAGASSPATPAAATRHHSTRSKSAISIGDSAKKETPQEKN
ASSSKGKGKAVLKSGQDEGRGGPQTRNAARRKAALDKDAQMKSADAESTSEDEDFDISPV
EIDDALVIEDDDISEDDDEDHEDVLGDDSLPVCTPDKVHDVKLGDSTEERPVDSQTNPAS
GSSSRGTANRGSDSTEFRAANSSGSRGAMSFAAAAMAGLASANGRGIRGGRDRHGRPLFG
SNDSPRLIFSSGGKQLNRHLTIYQAIQRQLVLDEDDDERYNGSDFVSSDGSRLWGDIYTV
TYQRADSETAGNVSSTTPSKSTTKAGSTSNSNSDSRFHQMSLLDSLLQGELPCDMERNNP
TYNILSLLRVLEGLNQLAPRLRVQSAIDSFAEGKISSLDDLKVTGVRVPSDEFINSKLTP
KLSRQIQDALALCSGSLPSWCYQLTKACPFLFPFEIRRQYFYSTAFGLSRALHRLQQQQG
ADGHGSMNEREFRVGRLQRQKVRVSRNRILDSAAKVMEMYSSQKAVLEVEYFGEVGTGLG
PTLEFYTLLSHDLQKAGMKMWRSNLSDDKTAGKGSGDLILAPLGLFPRPWPLTADTSDGG
SFFKVTEHFRLLGRVMAKALQDGRLLDLPLSGAFYKLVLGQELDLHDISLFDAEFGKTLQ
ELQALVSRKHFLESIHDRNEIPNLRFRGAPIEDLCLDFTLPGYPDFVLKTGDDNVDLNNL
EEYISLVVAATVKTGVTRQMEAFRAGFNQVFDISSLQIFSPNELDYLLCGRGELWEADTL
VEHIKFDHGYTSKSPAVVNLLEIMGEFNPEQQRAFCQFVTGAPRLPPGGLAVLNPKLTIV
RKHSSTATNTASNAAGVSESADDDLPSVMTCANYLKLPPYSTKAIMYKKLLYAINEGQGS
FDLS
NT seq
5595 nt
NT seq
+upstream
nt +downstream
nt
atggaaactcgtagccggaaaagggcagaggcttcctcatcagccgcccagtctactcgg
tcagccaaacgcactcgtttttcgacttcaaacgctccggtattatcgacttcttctact
actactgctactactcgatcacgcgctgcttcttttaatatggataataatttgaattct
gttattgaatcttccgggtccgggtcgggtcgtggccgtaggtctagaaagaataatagt
acttctaataatcagaatcttgaaaatccggataataaagggaaagaaaaagaacatgaa
gttagagatagagatgataataataatttgggattgaatattgatggtgatcattctcat
catcatcatcatgatgacgatgatgacgatgatgacgacgatagtgaaggcggaaatgtc
gggatattgcatcagaatttgacgtctgcgagtagtgcactgcaaggtttgttaaggaag
ttgggtgcaggattggatgatttgttgccgtcatctgcaatggggtctgcgtcgtcttca
caccagagcgggaggttgaagaagatattgtcgggtttgagggcggatggtgaagaaggg
aagcaagttgaggcgttgacgcagttatgtgatatgctttctattggtactgaggattcg
ttgagtacgttttcggtggattcttttgttcctgtgcttgttgggttgcttaatcacgag
agtaatccagatattatgttgcttgctgctagagggataacgcatctttgtgatgtgttg
ccgtcttcttgtgctgctgttgtgcattatggtgccgtttcttgctttgttgctaggttg
cttactatcgagtatatggacttggctgaacagtcattgcaagctttgaagaagatatct
caggagcacccgactgcttgcttgcgcgcaggggcactaatggcagtgctctcttatctt
gacttcttttcaacaggagtccagcgtgtggcgttatctactgctgcaaacatgtgcaaa
aagcttccatctgatgcagctgattttgtcatggaagccgttcctttattgaccaatctt
cttcagtaccatgatgctaaggttttggaacatgcttcagtttgcttgactagaattgcg
gaagcttttgcagcatctcccgatcagctggacgagctttgtgtccatggattggttaaa
caagcagccactctcatttcaaccagcagttctggaggtggacaagcttctcttagtaca
tctacatacacgggattgatacgattgctgtctacatgtgctagtggttctcccttggga
tctaagactttgctccatttagggattagtgggattctcaaagatatattatcgggttct
ggtcttgttgcaacaatgtctgtctcgcctgccttgagtagacctcctgaacagattttt
gagattgtgaatttggcaaatgagcttcttcctccattacctaatggaaccataactctt
cctaccagtaatgtatttgtcaaaggctctctcttgaagaagtcccccactggtagttct
agcaagcaagaagaatcgagtggcggtgcacctgatgtttcagctcgtgagaagttgctg
actgatcagcccgagcttctgcagcaatttgggatggaccttcttcctgttctgattcag
atatatgggtcaagtgtaaatgcacctgtgcgtcacaaatgtctttcggttattgggaag
ttgatgtactttagcacagctgatatgattcaatctctacttggtgttgccaacatatca
agttttttggctggggttttggcatggaaggaccctcaagtgttggttccttcgcttcaa
atcgcggagatactaatggagaaacttccagaaacttttagtaaaatgtttgttagagaa
ggcgttgttcatgcaatagatacactttccgtgtcatcatctggtaatgctctttcccca
ccattatcaagtgagaaggtaaatgattctattcctggatcctcgacacgctcgaggcgt
tatcgacaccgcattggtacctctagtacagatgtaaatgctgctgaagatttcaagaac
acaggcccccctgcaaactctgtagagttgccagctgtcagttccagtctccgaacggcg
gttagtactagtgcaaaggctttcaaagacaaatactttccttccgatcctggagctccg
gaagttggggttacggatgatcttttacatttgaaaaatctctgtaagaagttgggttct
gctgtggatgatcagaagatgaaatctaaaggaaaatcaaaagtttctggcccgcggttc
actgatttttcgcctggaaaggaagaaagtttattaggagtgataaccgagatgctttca
gagctaacaaaagatgatggtgtttcaacgtttgaatttattggtagtggcgttgttgct
gctttactgaactacttctcttgtggacacttttcgaaagaaaaggtatcagaagcgaat
atgcccaagttacgacaactagctattaaacgatacacgtcgttcatagaagttgctctt
ccgttgagtgttaatgagggtaaacaagctcctatgagcattttagttcagaagctccaa
tatgctttaacatctttagagcgttttccagtggtgttgagtcacagtgctagatcatct
actggaaatgcacgcttgtcatctggtcttggtgcattatctcagccatttaagttgcgg
ctttgcagagcacatggtgaaaagactcttcgtgattattcttcaaatgttgtccttatt
gatcctttagccagcttggcagctgtggaggactttctatggccacgtgttcaacgtagc
gagtctagtcaaaagccttctggatatgttgggaacttggagtctggaaccacacctgca
ggggctggggcttcgtctccagctactcctgcggctgcaacaagacatcactccactaga
tccaagtcagcaattagtataggggactcggccaaaaaggagacaccacaagagaagaat
gcaagctcttctaaggggaaggggaaagctgtattgaagtctggtcaggatgaggggaga
ggtggaccacagacaagaaatgctgctaggagaaaggctgctctggataaagatgcacag
atgaagtctgcagatgccgagtctacttctgaggatgaggactttgatatatcacccgtg
gagattgatgatgccttggtgattgaagatgatgacatatctgaggacgatgatgaagat
catgaagatgtactaggagatgattcacttcccgtttgcacgccagacaaagttcatgat
gttaaattgggtgactcaactgaggaaaggcctgttgatagccagacaaatcctgcttca
ggctctagtagcagaggtactgccaatcgtggctcagactccacagaattcagagctgca
aattcttctggttcaaggggtgctatgtcatttgctgctgctgccatggctgggcttgca
tccgccaatggtagaggtatcaggggcggcagagaccgtcatgggcggcctctttttggc
tccaatgattctcccaggctcatattttcttcaggggggaagcaacttaaccgtcatttg
accatctatcaagccattcaaaggcaacttgttcttgatgaggatgatgatgagaggtat
aacggaagtgattttgtatctagcgatggaagtaggttatggggtgatatatataccgtc
acataccaaagagcagacagcgaaacagctggaaacgtgagttctacaaccccatctaaa
tccactactaaagcggggtccacctcaaactccaatagtgattcacggttccatcaaatg
tctcttctagatagtcttttacaaggggagcttccttgtgatatggaaaggaataaccct
acatacaacatattgtctctattacgtgtattagagggtttaaaccagctggcaccacgc
ttacgtgtccagtcagcaattgacagttttgctgaagggaaaatctcaagcctagatgat
ctgaaagttactggtgttagggttccatctgatgagtttatcaatagcaaattaactcca
aagttgtctagacaaattcaagatgctcttgcactttgcagtggtagtcttccttcatgg
tgttatcagctgacaaaagcatgcccgtttttgtttccctttgagattaggcgtcagtat
ttttattcaactgcttttggtttatctcgtgcattgcatcgtcttcaacagcagcagggt
gcggatggccatgggtctatgaatgagagggaatttagggtcggaaggctacaacgccag
aaagttcgtgtctcccgaaatcgtattttggattctgctgcaaaagtcatggaaatgtat
tcaagtcaaaaggcagttcttgaagtagaatattttggtgaagttggcactggtttgggc
cctacattggagttctataccctattaagtcatgaccttcagaaagcaggaatgaaaatg
tggagatctaatttgtctgatgataaaacagctggcaagggtagtggtgaccttatattg
gcacctcttgggttgttcccgcgcccatggcctcttaccgctgatacatctgatggtggc
tcatttttcaaggtaactgagcattttcgtcttcttggtcgtgtaatggccaaagcactt
caagatgggcggcttttggatctgcccctttcaggggcgttttataagcttgtgcttgga
caggaacttgatctgcatgacatttcattgtttgatgctgaatttggtaagacgttacaa
gaattgcaagctcttgttagccggaaacacttcctagagtctatacatgaccgaaatgaa
ataccgaacttaaggtttaggggggcaccaattgaagatctttgcttggacttcacactt
cctggctatcccgatttcgttctcaaaactggcgatgacaatgttgatctaaacaacttg
gaggagtacatttctctggtagttgctgctactgttaagactggtgtaacacgccaaatg
gaagcatttagagccgggtttaatcaggtgtttgacatttcttctctacaaatattttct
cctaatgaattggattatttactttgcggacgcggagagttgtgggaggctgatacactt
gttgaacacatcaagtttgatcacggatacacttccaagagccccgcagtagttaatttg
cttgagataatgggagaattcaacccggaacaacagcgagcattctgtcaatttgtgact
ggtgcacctcgccttcctcctggtggtttggcagttttgaatcctaagttgactattgtt
agaaagcattcttcaactgccaccaatacggcgtccaatgcagctggagtgtcggaatct
gcagatgatgatttgccaagtgtcatgacctgtgctaattacctgaagctccctccgtac
tccacaaaggcgatcatgtacaagaagctcctttatgctattaacgaaggacagggatca
tttgatttgtcttga
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integrated database retrieval system
