Erigeron canadensis (horseweed): 122598085
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Entry
122598085 CDS
T07610
Name
(RefSeq) YTH domain-containing protein ECT4-like
KO
K20102
YTH domain-containing family protein
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecad03019
]
122598085
Messenger RNA biogenesis [BR:
ecad03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122598085
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
DUF3942
Motif
Other DBs
NCBI-GeneID:
122598085
NCBI-ProteinID:
XP_043626631
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Position
1:59011965..59015629
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AA seq
642 aa
AA seq
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MATVAPTADQATDLMKNLTLDSQSKTLEVSEPAKKPSVGSGDIGNGQSQPLDRSLTPLIP
DYMDPTVAYYHNGYASPAYYYGGYDGATSDWDDYSRYLNTEGVDLSHGVYGDNGSVMYPN
YGYAPPYGPYSPAASPVPTAGHDGQLFGAQHYQYPSPYFPQMTQTVPPKGDISRSAASGQ
PPLTVGTAGGIPNSTMKANPGSVSVRPATYQNSAYNGSGSYGRGSQNSYQDPRYAFDGVR
SPVSWLDASMYSSGLPRNTTNTTPLSNATGFASKNQNIHPNTHLVGPRPVSGMNAASGYM
NRMYPNKVYGQYQSAYGSGLGFGSNTYGSQNNGHGWLSVNSKYKPRGRGNGFFGSSNENA
DGLNELNRGPRTRVTKAQSVPTSVTIAVKEPNGDSSNIDGVEKEKVCAVPDKEQYNQTEF
PDTYADAKFFIIKSYSEDDVHKSIKYNVWSSTQNGNKKLDAAYQEAQQKSGQCPIFLFFS
VNTSGQFVGVAEMVGPVDFDKSVEYWQQDKWIGCFPVKWHIVKDVPNSLLKHITLEYNEN
KPVTNSRDTQEVKLEQGLQVIKIFKEHSSKQCILDDFEFYEEREKRIQEKKAKQQLFQKQ
AWEEKPAIVEKNREEVAPELVKEEIKVTDNGPVIVNGVANGC
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggccactgtagctcctactgctgatcaagctactgatctgatgaagaatttgacattg
gattcgcaatcgaagactttggaagtttcggagcctgcaaaaaaaccttctgttggttca
ggggacattggcaatggtcaaagtcaaccactcgacaggtcgcttactccattgattccg
gattatatggatccaactgtcgcttattatcataatggttatgcttctcctgcttattat
tatggagggtatgatggggctaccagtgactgggatgactactcgagatatttgaatacc
gaaggagttgatctgtctcatggtgtttatggggacaatggttcagtcatgtatcctaat
tatggatatgcacctccttatggtccttattctcctgctgcttcacctgtgccaacagcg
ggtcatgatggccaactttttggagctcaacattaccaatacccaagtccatacttccca
caaatgactcaaacggtcccgcctaaaggtgatatttcgagatctgcagcctctggtcaa
ccaccattgactgtaggcacggccggtggaattcccaattccactatgaaggcaaaccct
ggctctgtttcagtcagaccagccacatatcagaattcagcttataatggaagtggttcc
tatggcaggggttcacaaaatagttatcaggatccaagatacgcatttgatggggtccgc
tctccagtttcatggttagacgcatcaatgtattctagtgggctacctagaaacactacc
aacaccacccctttatcaaatgcaactggttttgcatcaaaaaatcagaacatccatcct
aacacccatctcgtgggtccaagaccagtgtcagggatgaatgcagcaagcggatatatg
aatagaatgtatccaaacaaggtatacggtcagtaccagagtgcatatggatctggtctt
gggtttggctctaatacctatggctcacaaaataacgggcatggttggttgtctgtcaat
agcaagtacaagcctagaggaagaggcaacggtttcttcgggagtagcaatgaaaatgct
gatggtctaaatgagctaaaccggggcccaagaaccagggtaacgaaagcccaaagtgtt
ccaacatcagtcactatagccgtcaaggaaccaaatggtgattcgtcaaacatcgatgga
gttgagaaagagaaggtttgtgcagttccagacaaagagcaatacaaccagactgaattt
cccgacacctatgcagatgctaagttctttattatcaagtcttatagtgaagacgatgtg
cataagagcatcaagtataatgtttggtccagtacacaaaatggaaacaaaaagcttgat
gcagcataccaggaggctcaacaaaagtctggacaatgccccatatttcttttcttttcg
gtcaacacaagcgggcaatttgttggtgttgctgagatggtggggccagttgattttgat
aaaagtgtggaatactggcaacaagacaaatggattggttgctttcctgttaagtggcat
attgttaaggatgtgcccaacagcttgttgaagcatatcactcttgaatacaacgagaat
aaacctgtaaccaatagcagggacacccaagaggtgaagctagagcagggattgcaggtg
ataaaaatattcaaagaacattctagcaagcaatgcatattagatgattttgagttctat
gaggagagagaaaagagaattcaggagaaaaaagcaaagcaacaactgttccaaaaacag
gcatgggaagaaaaaccagccattgttgagaagaacagagaagaggttgcacccgaattg
gtcaaagaagagatcaaagttacagataatggaccagtcatagttaatggggttgctaat
ggttgctaa
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