Erigeron canadensis (horseweed): 122598121
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Entry
122598121 CDS
T07610
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
Organism
ecad
Erigeron canadensis (horseweed)
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
zf-CCHC
YgbB
CMS1
zf-CCHC_4
ERCC3_RAD25_C
zf-CCHC_2
Cas3-like_C_2
PRP1_N
Motif
Other DBs
NCBI-GeneID:
122598121
NCBI-ProteinID:
XP_043626658
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Position
4:complement(3512365..3518531)
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AA seq
782 aa
AA seq
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MASSCSSSIIGVSSIFHKNPSLEHLSRTPLHLPRCTDKTHFTSLKTTARIKHIGAGVGNG
GSGFVTSATATPNSILSEKAFKGLGVFDEDSNSLDDSDREYEDEGLVSENENISDEDDND
DELAITKLGLPQKLVQSLEKREITRLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIP
IIKRLTEDDEARLSSRRAQRLPRVLVLAPTRELARQVETEIKESAPYLSTVCVYGGVSYT
SQQNAISRGVDVVVGTPGRLIDLIGSNSLKLGEVQFLVLDEADQMLAVGFEEDVEHILEK
LPSERQSMLFSATMPGWVKKLSRKYLNNPLTIDLVGDQDEKLAEGIKLYAIPTTQTSKRT
ILGDLVTVYAKGGKTIVFTQTKRDADEVSLALTNSITSEALHGDISQHQRERTLNGFRQG
KFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGRAILMFTNSQR
RTIRSLERDVGCKFEFVSPPAVEDVLESSAQQVVATLAGVHRESVEFFTPTAEKLIEEQG
ASALAAALAQLSGFSKPPSSRSLITHEQGWTTLQLTRDPALSRGFMSARTVTGFLADVYA
TAADELGKIHIIADEQVQGAVFDLPEEIAKKLLEKDIPPGNSITKITKLPALQDDGPAGD
FYGRFSNRERSSRGAGSRRGGYSGSRGGGWGGSRFSSDDEGDNFRRGGRSGGSSWSRGGS
GGSRSGGSDWLIGERRSSRSPSFGTRGSGSSSRTRDRNFDGACFNCGRSGHRASECPKKQ
DY
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggcttcatcttgttcttcatcaattataggtgtttcttcaattttccacaaaaaccca
tctttagaacacctttcaagaacccctttacacctcccacgttgtacagacaagacccac
ttcacatccttaaaaacaaccgctagaatcaaacatataggtgcaggtgttggtaatggg
ggttccgggtttgttacgtcggctacggcgaccccgaattcgatattgagtgagaaagct
tttaaagggttgggtgtttttgatgaagatagtaattctttagatgatagtgatagagag
tatgaagatgaaggactagttagtgaaaatgagaatattagtgatgaggatgataatgat
gatgaacttgcaattactaaattgggtttgcctcaaaaacttgtccagtctcttgaaaag
agggaaattactagacttttcccaattcaaagagcagtgttagtccctgcattagagggc
aaagatattattgctcgtgccaaaaccggaacaggtaaaacattagcttttgggattccc
ataatcaaaagactaactgaagatgatgaagcaagactttcttctagacgcgctcaacgt
cttcctagagtgttagtacttgcacctacaagggaattggcgaggcaagtagaaacagag
atcaaagagtctgccccatatttgagcactgtttgtgtgtatggtggtgtctcatatact
tcacaacaaaatgcaatttctcgtggagttgatgttgtggttggaacaccaggaagactc
attgatcttattggaagtaacagcctaaaattgggtgaggttcagttcttggttcttgat
gaagctgatcaaatgcttgctgtcggttttgaggaagatgtggaacatattttagagaag
cttccatcagagaggcaaagcatgcttttttcagcaactatgcctggttgggtcaagaaa
ctttcgagaaaatatttgaacaatccattgacaattgatttggttggagatcaagatgaa
aagctagcagagggtatcaagctatatgcaatcccaacaactcaaacctcgaagcggaca
atacttggcgatcttgtcacggtgtatgcaaagggtgggaagacaattgtttttactcaa
acaaaaagggatgcagatgaggtctctttggcgttgactaatagcattacttctgaggca
ttacatggtgatatatctcaacatcaaagagaaagaacattgaacggattcagacaagga
aaatttactgttctcgttgctactgatgttgcttctcgggggcttgatatacccaacgtc
gatttagtcatccactatgaactcccgaatgatcccgagacttttgtgcaccgatctggt
agaacagggcgtgcaggaaaggaaggcagagctattttgatgtttacaaatagtcagagg
agaacaattagatctcttgagcgtgatgtgggatgcaaatttgagtttgtaagtcctcca
gctgtagaagatgttttggagtcttcggctcagcaagttgttgccacacttgctggtgtt
catcgtgagtctgtggagttcttcaccccaactgcagaaaagctaattgaagaacagggt
gcaagtgcacttgctgctgcccttgcacaattgagtggtttctcaaagcctccctcatcc
cgttcacttatcacgcatgagcagggatggactacgttgcaactaacccgggatcccgct
ttatcaagagggttcatgtcagctagaaccgttactggattcttggctgatgtttatgca
actgctgctgatgaattgggaaaaatacatataattgcagacgaacaggttcagggagca
gtttttgatcttccagaagagatcgccaaaaagctactagagaaggacatcccacctggc
aatagtattacaaaaattacaaagttgcccgcgttgcaagatgatggtccagcaggtgac
ttttatggtaggttttccaacagggaaagaagttccaggggagctggttcaagaaggggg
ggttacagtggttcccgtggtggtggttggggtggtagtcgattctcatcagacgatgaa
ggagataactttaggcgaggcggtaggagtggcggcagtagttggtcaagaggcggctca
gggggttcgagatctgggggaagtgattggctaattggtgagagacgatcttcacgctct
ccgtccttcggaactagaggttctggttcctcatctcggactagggacagaaactttgat
ggcgcatgcttcaactgtggacggtctgggcacagagcatcagagtgtcccaagaagcaa
gattattag
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