Erigeron canadensis (horseweed): 122598180
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Entry
122598180 CDS
T07610
Name
(RefSeq) elongation factor 1-alpha-like isoform X1
KO
K03231
elongation factor 1-alpha
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122598180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecad03019
]
122598180
03016 Transfer RNA biogenesis [BR:
ecad03016
]
122598180
03012 Translation factors [BR:
ecad03012
]
122598180
04131 Membrane trafficking [BR:
ecad04131
]
122598180
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecad04147
]
122598180
Messenger RNA biogenesis [BR:
ecad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
122598180
Transfer RNA biogenesis [BR:
ecad03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
122598180
Translation factors [BR:
ecad03012
]
Eukaryotic type
Elongation factors
122598180
Membrane trafficking [BR:
ecad04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
122598180
Exosome [BR:
ecad04147
]
Exosomal proteins
Proteins found in most exosomes
122598180
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
ATP_bind_1
nSTAND3
FcpA
Motif
Other DBs
NCBI-GeneID:
122598180
NCBI-ProteinID:
XP_043626714
LinkDB
All DBs
Position
4:complement(37775315..37776721)
Genome browser
AA seq
446 aa
AA seq
DB search
MGEEKEVEKAHINIVVIGDANSGKSTTAGHLIYKLGGIDKTVIERFEKEAAEMHQVGVKY
AWVLDRLKAERERGNTIDNTMCKFETTKYYCSVLDTPGQHRFIKNMITGTSQADCALLIV
DSERFEYGMTTGLIREHILLAFILGVKQIICCCNKLALLFVVLQMDATRPKYAQYRYEDI
VEDLESYFMKVGYDPDKIPFVPISGFEGDNLTERSPNLKWYKGPTLLEAIDRISEPKRLF
DKPLRLPVHDVYHISGIGTVPVGRVETGVMKPGMVVTFGPSGLTAEVKSIEMHNKPLLEA
VPGDSVGFSVKNVASKDLKRGYVASNSKDDPAKGAASFTSHVIIMNHPGQIRKGYTPMLD
CHTCHITVKFAELLSKIDRRSFEELEREPEFLKNGEAGMVKMVPTKPMVVETFSEYPPLG
RFAVRDLRQTVGVGVIKSVDKKDPTG
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaagaaaaagaagtagaaaaggctcatatcaacattgtggtcattggagatgca
aattctggcaagtcaactactgcaggccacttgatctacaagctaggtggaattgacaag
actgtgatcgaaaggttcgagaaagaggctgctgagatgcaccaagttggagtcaagtat
gcttgggtgttggacaggctcaaggcagagcgtgaaaggggtaatactatcgacaataca
atgtgcaaattcgagaccactaaatattactgctctgtccttgatactcctggacagcat
aggttcatcaagaacatgatcactggaacctcccaggccgactgtgcccttctcatcgtt
gattctgaacgttttgaatatggaatgaccaccggacttattcgtgaacacattttgctt
gcatttatacttggtgtcaagcaaataatttgctgctgtaacaagctagctttgttattt
gttgttttgcaaatggatgctactagacccaaatacgcacaatataggtatgaagatatt
gtcgaagatttggagtcctacttcatgaaagtcggatatgaccctgacaaaatcccattt
gtcccaatttctggttttgagggcgataacttgactgagaggtcacctaacctaaaatgg
tataagggtccaactctacttgaagccattgaccgaatcagtgagccaaaaagactattt
gacaagcctctccgccttccagttcatgatgtctaccacattagtgggatcggaactgtg
cctgtgggacgtgttgaaactggtgtgatgaagccaggtatggtggtcacttttggccca
agtggattgacagctgaggtcaaatctattgagatgcacaacaaaccactgcttgaggca
gtgccaggagacagtgttggtttcagtgttaaaaatgttgcatcgaaggatcttaaacgt
gggtatgttgcttcaaactctaaggatgatcctgcaaagggtgctgctagctttacttct
cacgtcatcatcatgaaccacccgggtcaaattagaaaagggtacacaccaatgcttgat
tgccatacctgtcatattactgttaagtttgctgagctattgagcaagattgaccggagg
tcttttgaggagctggagcgggaacctgagttcttgaaaaatggtgaggctggaatggtg
aagatggttccaacaaagccgatggtggttgagactttctccgagtaccctccattgggt
cggtttgctgtccgggacttgaggcagactgttggtgtgggcgtgatcaagagcgtggat
aagaaggatccaactggatga
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