Erigeron canadensis (horseweed): 122598190
Help
Entry
122598190 CDS
T07610
Name
(RefSeq) single-strand DNA endonuclease 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecad03400
]
122598190
DNA repair and recombination proteins [BR:
ecad03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
122598190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Chromo_SEND1
XPG_I
Chromo_2
XPG_N
Motif
Other DBs
NCBI-GeneID:
122598190
NCBI-ProteinID:
XP_043626729
LinkDB
All DBs
Position
4:complement(28714452..28721161)
Genome browser
AA seq
610 aa
AA seq
DB search
MVQLANVNKSHCAMKDKLYLKGLFHRIRALIALNCSIIFVTDGSIPGIKVSSYRRRLQSD
NEGTREEPLSDKTTSLQRNMGSEFSCMIKEAKILGSALGVPCLDGIEEGEAQCALLDSES
LCDGCFSSDSDTFLFGATTVYRDICLGEGGYVVCYEMADIEKKLGFGRNSLIALAVLLGS
DYSSGVRGVGPELACKIVKSLGEAAVLHKLASEDLSLLKKANCSKKCNQVCVFNDKENIP
PHASNINGPKGNLTRNNQFQQVMDAYLKPKCHSADSQMVQRVLGVHPFQRIMLQRTCHRY
FEWPAEKTDEYILPKIAERELRRFANLRFASSNLGVQLPLDKMPVKCPISEIVKRRQAQG
KECFEVLWEDIDGLASSIVPGDLVKSACLEKIVEFEENLAEKKKPKPRKPRLKKTDNNKS
VDKVDLKLQELLLEIEGTRSHSQNYGLHDTPLVKTRPNNEEIYQLIDEPLVSTRPNIEEN
YQLLDGPLDVPLFTQINHIEKNYQLLDEPMGNMRSDHEKVKMTEKPADSCDIEPKIVNLS
TPLTMKGNRIVDTEIVDLLSPLSLDCLSKHHQNDADVIDLSESDMDVSPEHAKKAKELRL
FVAKIKGEWS
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggttcaattggcaaatgtaaacaaatcccattgtgcaatgaaagataagctttatctc
aagggtttgtttcaccgaattcgggctttaattgccttaaattgtagcatcatctttgtt
acagatggatcaattccgggcattaaagtatcgtcatataggaggcgcttgcagtcggac
aatgagggcactagagaagaacctttatcagacaaaactacttcacttcagaggaatatg
ggctctgaattctcatgtatgataaaagaggccaagattcttggctcggcgttaggggtt
ccatgtttagacggaatcgaggaaggtgaagctcagtgcgcattattggactccgagtca
ttatgtgatggatgtttctcttcagactcggatacctttctctttggagcaacaacagtg
tacagagatatatgcctaggagaaggtggttatgttgtttgttatgaaatggctgacatt
gagaagaaacttggatttggaagaaattcgttgattgcactagctgtccttcttggtagt
gattactcatcgggtgtccgtggggttggtccagaattggcatgcaagattgttaaatcg
ttgggtgaagctgcagtgcttcataaacttgcatcagaagacttgtcacttttaaagaag
gcaaattgttccaagaaatgtaatcaagtatgtgtgttcaatgataaagagaacatccct
cctcatgcatccaacattaatggacctaaaggtaatttaacaaggaataatcagtttcag
caggtgatggatgcatatctcaaaccgaaatgccattccgctgactctcaaatggttcag
agggttcttggtgtccatccatttcaacggatcatgcttcaacggacatgtcatcgatat
tttgagtggcctgcggagaaaacagatgagtatattcttccaaagattgccgaaagagaa
ttgagacgatttgcaaacttgcgatttgcttcttctaacctgggagttcagcttcctcta
gacaagatgccagtgaaatgtccgatttctgaaatagttaagcgcagacaagctcagggt
aaagaatgctttgaagttttgtgggaggacattgatggacttgctagctctattgtacca
ggtgatctagtcaagagtgcatgtttggaaaagatagtggaatttgaagaaaatttagct
gagaaaaagaagccaaaaccacgaaaaccgagactaaagaaaactgataataacaaatct
gtcgacaaagttgacctaaagctccaagaactattgcttgaaattgaaggtacaagatct
catagtcaaaactatgggttacacgacacgccactggtcaagacaaggccaaacaacgag
gaaatctaccagttaattgatgagccacttgtcagcacaaggccaaacattgaggaaaac
tatcagttactcgatggaccactcgatgtaccattgttcactcaaatcaatcacatagag
aaaaactatcagttactcgatgagccaatgggcaacatgaggtcagaccatgagaaagtt
aaaatgacagaaaagcctgcagacagttgtgatattgagccaaagattgtgaatctatca
acgcctttgacaatgaaaggaaatagaatagttgatacagagatagttgatcttttaagc
ccgctttcacttgattgtctatcaaaacatcatcaaaatgatgctgatgtgattgatttg
agtgaatcagacatggacgtgtcgcctgaacatgcgaaaaaggccaaagaacttagatta
tttgtagctaaaatcaagggcgaatggtcttga
DBGET
integrated database retrieval system
